Cardiocondyla obscurior: 139113109
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Entry
139113109 CDS
T10704
Symbol
Pea
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03040
Spliceosome
Brite
Enzymes [BR:
cobs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139113109 (Pea)
Spliceosome [BR:
cobs03041
]
Complex C
Other components
Step II factors
139113109 (Pea)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
CiPC
AAA_30
AAA_16
Motif
Other DBs
NCBI-GeneID:
139113109
NCBI-ProteinID:
XP_070530126
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All DBs
Position
LG02:complement(9058625..9063026)
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AA seq
1203 aa
AA seq
DB search
MEEVPKLEHLSLVSKICTELENHLGLNDKDLAEFIIHLAEKNSTFPSFKKVLIENGAEFS
DSFMANLLRIIQHMKPVKTSTEKSSKSTIKQDELALKFPALALPNENSRIESNNVRDEDI
VNDVMASFEAFAPSNKKQSVNAEENNDKADKNEKREKSKRGRKSRSKSRERRRHRSRSEN
RKERRHRSRTRSRSRYRSRDRARKRRSRSRERKRSWSRDRKDARHARRRDTDRSRSRSAE
ETLSAEPEVGKIYAGKVANIVPFGCFVQLEGLRRRWEGLVHISQLRREGRVANASDVVSR
GQKVLVKVLSVGGQKVSLSMKDVDQETGRDLNPVVPIAKAEEDEKHLRNPDRPTSLLELQ
GNYDEDETYSRKRVQRLSSPEKWEIKQMLAASCIDRSELPEFDTETGILPREDDEEEDVE
IELVEEEPPFLHGHGRALGDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEM
DSVPTGLNKNWIDPLPEAESRTLAANMRGIGLQTQDLPEWKKHVIGGKKSSFGKKTNLTL
LEQRQSLPIYKLRDDLVKAVTDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQP
RRVAAMSVAKRVAEEFGCCLGQEVGYTIRFEDCTGPETSIKYMTDGMLLRECLMDLDLKT
YSVIMLDEAHERTIHTDVLFGLLKQAVGRRPDLKLIVTSATLDAVKFSQYFFEAPIFTIP
GRTFEVEVMYTKEPETDYLDAALITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMK
SLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPG
FVKQKVYNSKTGMDSLIVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAYRDEMLPTPVP
EIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALESLHSLSALDNEGLLTRLGR
RMAEFPLEPNLSKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQP
EGDHLTLLAVYNSWKNNKLSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK
NTVRIQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT
KEYMREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRR
RRN
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggttccaaaattagagcacctttctttggtgtcgaagatctgcacagagttg
gagaatcacttaggactgaacgacaaggatttggccgaattcattatacatctcgccgag
aagaacagcacgtttccctcgttcaagaaggtcctgattgagaatggggccgaattctct
gactcattcatggctaatctactcaggataatacagcatatgaagccggtgaaaacgtcg
actgagaaatcctccaagtcaacgattaaacaagatgagctggcattaaaattcccagcg
ctggcgttaccgaatgagaattcacgtatcgaaagcaacaatgtcagggatgaggatatc
gtcaacgatgtgatggcttcctttgaagcgtttgcgccgtctaataaaaaacagtcggtt
aatgccgaagaaaataatgacaaagcagacaagaacgagaagagagaaaaaagcaaacgc
ggaagaaaaagcagaagcaagtcaagggagagaagacgacaccgatctagatcggaaaat
cgtaaagagcggcgacacagatctagaacgcgttccagatcacgttatagatcgcgcgat
cgagcgcgaaagaggcgttcgagatcgagagagcgcaaaagatcgtggtctcgcgatcgc
aaagatgctcgacacgcgagaagacgcgacaccgacagatcgagatcaagatccgccgaa
gagacgctttccgcggaaccggaagtaggcaagatttacgcaggtaaagtcgcaaatatc
gtgccgttcggatgtttcgttcaactggaaggtttaagacggcgttgggagggcttagtt
catatctctcaattgcgacgggaaggccgagttgcgaacgcgagtgacgtggtttccaga
ggacaaaaggtattggtgaaggttctcagcgtcggtgggcagaaagtatctttaagcatg
aaagacgtcgatcaagaaactgggagggatttaaatcccgtagtgccgatcgcaaaagcg
gaggaggatgaaaaacatttgcgcaatccggataggccgacttccctactggagcttcaa
ggtaattacgacgaagacgagacgtattcgaggaagcgcgtgcagcgtttgtcgtcgccg
gagaaatgggaaatcaagcagatgttggctgcgtcgtgcatcgatcgaagtgagttgccg
gaatttgacacggaaaccggaatcttaccgcgagaggacgacgaagaggaggatgtagag
atcgagcttgttgaagaagagccaccgtttctgcatggtcacggaagagcgctgggtgac
cttagtcccgtacgaatagttaaaaatccggatggctcgctggcgcaagcggcgatgatg
cagagcgctctcgcgaaagagcgaagagagcaaaaaatgctgcaacgcgagcaagaaatg
gattccgtgcccaccggcttgaataaaaattggattgatccgctaccagaggcggagagt
cgcacgctggcggcgaatatgcgtggcatcggtctgcaaacgcaggatctccccgaatgg
aaaaaacacgtgataggcggcaaaaaatcatcgtttggtaaaaagacgaatctgacgctg
ttggagcagcgtcaaagcctgccaatttataagttgcgcgatgatctggttaaagctgtg
acggataatcaaattttaattgttattggagagactggctcgggcaagacaactcaaatc
acgcagtatctagcggaggctggtttcaccgcgcgagggaagatcggctgcacacaacca
cgacgtgtcgccgctatgagcgtggctaaaagagtcgcggaagagtttggttgctgtcta
ggtcaagaggtcggttacaccatccgtttcgaagactgcaccgggccagagaccagcatc
aagtacatgacggacggtatgttactgcgcgaatgcttaatggatctagatctcaaaacg
tattcggtaataatgttagacgaggctcacgagcgtacaatacacacagacgttttattc
ggtttactgaagcaggctgtaggccgcaggcctgatctcaagctgatcgtcactagtgct
accctcgatgcggttaaattctcgcagtatttttttgaagcacctatctttaccataccg
gggcgtacgttcgaggtcgaggtgatgtacacgaaggaacccgaaactgattacctggac
gccgcgctgatcaccgtcatgcagattcatctgcgcgagccaccgggcgatatcttactt
ttcctcaccggacaggaagaaatcgatacagcttgtgaaattctttacgaacgtatgaaa
tctctgggtccagatgtaccggagctaattattctgccagtttattcggctttaccttcc
gagatgcaaactagaatatttgagccagcgccgcccggctcgcgtaaggttgtcatcgcc
acgaatatcgccgaaaccagcctaactatcgacggtatatactacgtcgtcgatcccggt
tttgtcaaacaaaaagtctacaactccaagactggcatggacagtcttatagttacgcca
atcagccaagcggctgcgaaacaacgaagcggaagagctggtagaactggccctggaaag
tgttatcggctttacactgagagagcttacagagacgaaatgctgcccacaccggttccg
gagatacaacggacaaatctggccaccaccgtactgcaactcaagactatgggtattaat
gaccttctacactttgattttatggacgcgcctccagttgaatctctaatcatggcatta
gagtcgttgcacagcttgagcgctctcgataatgagggcttgctgacacgtctgggccga
cgaatggcagaatttccactcgaaccgaacttatctaagatgctaatcatgagtgtgcat
cttcaatgttccgacgagatcctgaccatcgtcagcatgctgtcagtgcagaatgtcttt
tatcgaccaaaagataaacaggctttagccgatcagaagaaagcgaaatttaatcaaccc
gagggtgatcatttaactttactggcggtttacaattcttggaagaacaacaaactgagt
aacgcttggtgttacgaaaatttcgtgcagataagaacattgaagcgtgcccaggatgta
cgtaagcaattgttaggtataatggatagacataaattagatgtagtatcagccggcaag
aacacagtgcgtatacaaaaagcagtttgttcaggatttttcagaaatgccgcgaaaaaa
gatccacaagaaggatatagaacgcttgtcgacagtcaagtagtctatattcatccaagc
agcgcgttatttaatcgtcaacccgaatgggtaatctatcacgaattggtgcaaactacc
aaagaatatatgagagaagtgacaacgatcgatccgaaatggttggttgagtttgcacct
gcatttttcaaattcagcgatccgacaaaacttagcaaattcaaaaagaatcagagactg
gaaccgctttataacaaatacgaggaaccaaacgcgtggagaatatcgcgggttcgcaga
cgccgtaattaa
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integrated database retrieval system
