Cardiocondyla obscurior: 139113219
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Entry
139113219 CDS
T10704
Name
(RefSeq) nipped-B protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cobs03036
]
139113219
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
139113219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
139113219
NCBI-ProteinID:
XP_070530296
LinkDB
All DBs
Position
LG02:complement(13035775..13049638)
Genome browser
AA seq
2268 aa
AA seq
DB search
MPERIKLKMNGVVPSVPITTLAGIASLTDLLPEMPLPTPLPQTLTNKSLLFHPRVAEEAK
ILLSIRDENLVPQLIMSLSQTSSEHIELKDNYANTEQSLENEQNTPELLKAILQINPDVF
RRTQHNSPRSWAQGGAPILHANQSPASYGRFSPSYSSSSGSRQTPQGSPAQTAAARSVLP
PLVVSGIAHTQHPRMPITPQNHTDISQMSPFAVPSPSPRGNVMTEQTRTMTTPQHIQEDT
NCMNPLSNVNLQPNMYSPAHMNSPNPSLASLTNMTPQHNMAGMTPQHNMHMTSPMRNVPL
QQHSTMGMQQNLYDSMISQQVQHALGSGPSLDIDNAVQENQQFLLDPVAGLSDIDLPMEN
IDSKQSVDHAIQHLLPTTQTTSYPNIHTTDMVNVLDTAAASMAPNVQHQQNNNSDKSMKF
SGTEKMKEPIVMLNRLSLADQALMQKSLAAFAEKSPSRATKINISNRDDASKTDSDSEEE
IGKNNKYFKARAKERQVQREKEKAERRKSEDKGRRRKRITDEEEEDDKRDSSYSPTKPKI
RKIEKKLVPVLAKLSVEELMETNTYQRFNSTIETIFENTEDITANADLEDDGEVLPEMLI
PKYQLHDLCIEAAKLKSLGAMESIPSDKLVRLLNILEKNIRDGARVSPLVDPDDDVDEGR
LWMQLAMERVQRAVEASVIALHIMTSSNMPKTVYLEDVIDRIILFMKFQLQNTIYPSFDP
VYKVDTKNKTDNFNSSGRKKRGHMKEVREKSILQVYNKMHELVGLLAELLNIQVLTDTSV
LHASSLGVAPFFVESVSDLQLSALKLVTVIFTKYEKHRRLLLDDILASIARLPSSKRSLR
TYRLNSEDYIQMLTALVLQLIQCVVVLSDSSKSKEDEEKKQLTHVDADVFIINKYETATR
IAGNFLTVFLNKCGSKGEEIDYRPLFENFVQDLLATVNKPEWPAAELLLSLLGNLLVGHF
SNKSSDMSLRVASIDYLGVVAARLRKDAVNSQCKLSTIDQIIRDIKLEQQKDSDYELIKD
KEIVGLSEDEERIVFLQKVLLDYLAVSGTKDHALGYARHFYLAQWYRDCAMEKSRVGQPK
NSPSKKMHKKRSKKKNRHHSSDQDTESECDEQDPDENDNNEQKNSEAYRIIEEKKKYIIS
RIRPCSTGTKPDILQTYIDYNSAELISQYLASKRPFSQSFDRYLKQILHVLTESSIAIRT
KAMKCLTMIVEADPSVLARVDMQLGVKHSFLDHSTSVREAAVDLVGKFVLSRPELIDKYY
DMLSARILDTGVSVRKRVIKILKDICMECPDFPKIPEICVKMIRRVNDEEGIRKLVMEVF
QNMWFTPVRERPTLDSDSLLKKVMNITDVVAASKDMGLEWFEQLLVSLFKPKEDKDDSTK
MQTEPPRALLTACKQIVDCLIQNVLRLEETNLHPEKLEKKGASQRLVACLTTLYLFAKIR
PRLLVNHASTLQPYLSLKCQTQGDYQIISSVAHTLELVVPLMEHPSETFLAQLEEDSVKL
ILQHDRSVVASCLSCLGSVVNNVTRNYKLIRDCFKKYYGHLTEYKSFYEKDPTNPMLIKY
RPFFRRALFTVGLLLRHFDFTDPEVIEGLADNIKDQVFETLSYLVHLDNEDIRHFTLSAI
GSLCIRHYEFMMLPELKELYHHLLTSEYALVQMRIQVLNNIEVYLQEEEKRMIKQDMEWA
KLSKQENLKEMGDVSSGMASTVIQLYIKEILESFLHANVSVRHAALKVIQLILAQGLVHP
VQIVPYLICMSTDCEKVVSHSADKQLQDIEKKYPGFIHMKSQFGIKLSYRLQKILQNDIT
VRGMRIKEGEFPGALNGFLYTILRNTKQQRRAIVLSFLKHFDEAAKTSLSQMLYLADNLA
YFTYQVQDEPLFIIHHIDIIISMSGTNLLQSFKEALIPKEGQSRHTSGQSIPHAIRHPIE
QLTAQPIGQLTTQSVGHLVGQAMGQPMEQPMDQTISHSISQTITPDNRPKSDQILTLEDE
EDDEEDEEAILARLPGDTTLLREYITASQGFLLLLTLRQHLKALYGFSDAKIGQYSPSEA
AKVYEKAVNRKNNLLFEPKATLQRLREGVANVNEELDTSGRKKLVKEFLDFKQLMLKFDP
EEPDDDGGNDAADTSGGGKHSAENQQAARIPPHTEANDARTIADGTVAGNATLAIAAGQQ
QYQLPSQSNLTAPTDHPNNSMNSLPAMPAAAAAATTTTTTTTGAAVPTTTPRVPKLTIHA
HPDARESHRKHRAHKTDKSVRKHKKKKRRRISDSSDSGEDYSDPDFLV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacgaatcaaactcaaaatgaatggggttgtaccgagtgtgccaataactacc
ctcgctggtattgcgagtcttacagacttgttacctgaaatgcccctaccgactccactg
ccacagactctaactaataaatcgctgctgtttcatccacgagtagcagaagaagctaaa
atactactaagcattcgtgatgaaaatctcgtaccgcagttgataatgtcactgtcgcaa
acgtcgtcagaacacattgaactcaaagataactatgcgaatactgagcaatcgctggaa
aacgagcaaaatacgccagaactactcaaggcaattttgcaaataaaccctgacgtattc
agaagaacccagcataattctccaagaagctgggcgcaaggtggtgcgcctatattacac
gcgaatcaatcacctgcgagttatggtcgtttctcgccgtcctattcgagctcttcgggc
tccaggcaaacgccccaaggtagtccggctcaaactgcagcagccaggtctgtacttcca
ccgctggtggtcagtggcattgctcatacgcagcatccacggatgccgattactccgcag
aatcatacagacatctcgcaaatgtctccttttgccgtgccttctccgtcgcccagaggt
aacgttatgaccgaacaaacaagaacgatgacaacgccccagcatatacaggaagacaca
aactgtatgaatccgctatcgaatgtaaatctacaaccgaacatgtactcgccggctcat
atgaattctcccaatccatcgttagcatcactcactaatatgacgcctcagcataacatg
gctggtatgacaccacaacataatatgcacatgacatctccaatgcgtaatgtgcctctg
caacaacattcgacgatgggtatgcagcagaatctgtatgattctatgataagtcaacaa
gttcaacatgcattaggaagcggtccatcgttagacattgataatgcagtacaagaaaat
cagcaatttcttctcgatccagtagctggtctttctgatatcgatctgccgatggagaat
atcgattcaaagcaaagtgttgatcatgcgatacaacatttattaccgactactcaaacc
acatcctatccgaatatacataccactgacatggttaatgttttagatacggctgcggct
agcatggcgcccaatgtgcaacatcaacagaacaataattcagacaagagtatgaaattt
tccgggacagaaaagatgaaggagcctattgttatgttaaacagattatctttggctgat
caagcgcttatgcaaaaaagtttagcggcgtttgcagaaaaatcgcccagtcgtgcaaca
aaaattaatatttccaatcgtgacgacgcgtcaaaaactgattctgatagcgaagaagaa
attggcaagaataataaatactttaaagctcgcgcgaaagaacggcaagtgcaacgtgag
aaagaaaaagcagagcggcggaaaagtgaggataaaggccgtaggcggaaaaggataacg
gacgaagaagaagaggatgataaacgagattcatcgtactcgcctacgaaaccaaaaata
cgcaagattgagaagaagctagtgcctgtattagccaaattgagcgtggaagaattaatg
gagaccaatacataccaacgatttaattctactatagagacgatttttgaaaataccgaa
gatattacagcaaacgcagatctggaagacgatggtgaagtacttccggaaatgcttatt
cccaagtatcagttgcatgatctttgtattgaagcagctaaactcaaaagtttaggcgcc
atggaatcgataccttcagataaattggtgaggttgttaaatattttggaaaagaatata
cgagacggcgcgagagtgtcaccgcttgtagatccggatgatgacgttgacgaaggacga
ttatggatgcaattagcgatggaacgagtgcagcgcgctgtggaagcatcggtgattgcc
ctgcatattatgacttctagcaatatgccgaaaacggtctacttggaagatgtaattgat
cgaataatcctcttcatgaagtttcagctacagaacacaatctatccttccttcgacccc
gtatataaagtagatacgaaaaataagactgacaattttaattctagcggacgcaagaag
cgaggacatatgaaggaagttcgcgaaaaaagtatcctgcaagtttataataagatgcac
gaattagtaggtttgttagctgagttattaaatatacaggttttaacggacacgagcgta
ttacatgcatcatcattaggcgttgcgccgttttttgtagaatctgtgagcgatcttcaa
ttgagtgcattaaaacttgttactgtaatatttacaaagtacgaaaagcatagaagacta
ctattggatgatattttggcatcaattgcgagactacctagcagcaaaagaagtctacgc
acatacaggctcaattccgaggattacatacaaatgttaaccgcattggtcttacagctt
attcaatgcgtagttgtgctctcggattctagtaaatcgaaagaggacgaagaaaagaag
cagctcactcatgtagacgctgatgtttttatcatcaataaatacgagaccgccaccaga
atcgccgggaattttttaacggtatttcttaataaatgcggcagtaagggcgaagaaatc
gattataggccattatttgagaattttgtacaagatttattggcgacagttaataaaccc
gagtggcccgccgctgaattgttactgagtcttctcggaaatctattagtgggacatttt
tctaataagagctctgatatgtcacttcgagtagcttccatcgattatcttggcgttgta
gcggccagattacgcaaagatgcggttaattcgcagtgcaaattgtcgaccatcgatcaa
attatacgagatatcaaactcgagcagcaaaaagattccgattacgagctcataaaagac
aaagaaattgtaggattaagcgaggacgaagaaagaattgtattcttgcagaaagtactt
ttggattacctggctgtcagcggaacaaaagatcatgctctcggatatgcacgtcatttt
tatctagctcaatggtatcgagattgcgcaatggaaaaatctcgagtgggtcagccgaaa
aatagcccgagcaaaaagatgcacaagaaacggtcgaagaaaaaaaatcggcatcatagc
agcgatcaagataccgagtctgagtgtgacgaacaagatcctgatgagaacgataacaac
gagcagaagaattcggaagcttatcgaattatagaagaaaaaaagaaatatattatcagc
agaataagaccttgcagcacaggaacgaaaccagacattctacaaacatacattgactat
aattccgcggaattaatttcgcaatacctcgcgtccaagaggccgttctcgcaaagtttc
gatagatatttgaagcagattcttcacgtgctaacagaatcgtcgattgctattagaacc
aaggcaatgaaatgtctcacaatgatcgtcgaagctgatccgagcgtgctggcgagggtg
gacatgcaattaggtgtgaaacattcgttccttgatcactcaacgtcagtacgggaagca
gcggttgacttggtaggaaaatttgtattgagtagacccgaattgattgataaatattac
gatatgttatcggcgagaattttagatactggtgtgagcgttcgaaaacgtgtcatcaag
attcttaaagacatctgcatggagtgtccggacttccctaaaattccagaaatatgcgtg
aaaatgataagaagagtaaacgatgaagagggaattcgaaagctcgtaatggaagttttt
caaaatatgtggtttactccagtaagagagcgtcctactcttgattcagattcgctgtta
aaaaaagtaatgaatattaccgacgttgtagcagctagcaaggatatgggactcgagtgg
tttgagcagcttttagtaagtttattcaagccgaaagaagataaggatgacagcacaaaa
atgcaaactgagccaccccgggctttattgacagcatgcaagcaaattgtagactgctta
attcagaatgtattacggctggaagaaacgaatttacatccggaaaaattagaaaagaaa
ggcgcgtcacagagattagtcgcgtgtttgacaactctttacttatttgcaaaaattcgg
ccacgattgctcgtaaatcacgctagtactttacaaccttatctgagtttaaaatgtcaa
acacagggcgattatcagataataagtagcgttgcacatacgctcgaattagtggtgcct
ctgatggaacatcccagtgaaacttttttagcacaactagaggaagattccgtgaaatta
attttgcagcacgatagatcggtcgtcgcgagctgtttatcgtgtttaggctctgtagtt
aataatgtcacacgaaactacaaactgatacgagactgcttcaagaaatattatggacat
ttaacagagtacaaatcattttacgaaaaagatccaacgaatcctatgttaataaaatac
agaccgtttttccgacgtgcgcttttcacagtcggcttattgctacgtcattttgatttt
acggatccagaagtgatagaaggcctagcggacaacatcaaagatcaagttttcgaaaca
cttagttatttagtacacttagataacgaagacattcgacattttacgttgtcagcgatt
ggctctctttgcattcgacattacgagtttatgatgctaccggaattgaaagaactttat
catcatttacttacatcggaatacgcattggttcaaatgagaattcaagtgcttaataac
attgaagtatatctacaagaagaggagaagagaatgatcaagcaggatatggaatgggcc
aagctgtcgaagcaggagaatttgaaagaaatgggagatgtgtcatcgggcatggcgagt
actgttattcagctttacatcaaagagattctcgaatccttcctgcatgctaacgtaagt
gttcgacatgcggctctcaaagttattcagttgatcctggcgcaaggtttagtacatccc
gtccagatagtgccctatctgatctgtatgagcaccgactgcgagaaagtcgtaagccac
agcgcggataaacaattacaagatattgaaaaaaaatatccgggctttattcacatgaaa
tcgcagtttggtattaaattgagctatcggctgcaaaaaatcttacaaaatgatatcacg
gtaagaggtatgcgaataaaagaaggcgagtttccaggcgcgcttaacggtttcctctac
acaatcttacgcaatacgaaacagcagaggcgagctattgtattatcttttctcaaacac
tttgacgaggcagccaaaactagtctgtcgcagatgctatacttggcggacaatctcgct
tactttacatatcaagtgcaggatgaaccactttttattattcatcacattgatatcatt
atttctatgtctggaacgaatctgttacaatcttttaaagaggctttaatacctaaagag
ggacagtctaggcatacatcaggacaatcgatacctcacgcgataagacacccgatagaa
caattaacagcacagccgataggacagctaacaacgcagtcagtaggacacctggtaggg
caggcgatgggacagccaatggaacagcctatggaccagacgataagtcactcaataagt
caaacgataactccagataatcgaccaaaatccgatcaaatattgactttggaggatgaa
gaagacgatgaagaagatgaagaagctattctggcaagattaccaggcgatactactttg
ctcagggagtatattaccgccagtcaaggctttttacttctactaacactcagacaacat
ctcaaagctctttatggtttttctgatgcaaaaataggtcaatattcaccgtcggaagcg
gctaaggtctatgaaaaggcggtaaatcgtaaaaataatttgctttttgagccaaaagct
acgttgcagaggctgcgagaaggcgtagcgaacgttaacgaagagctggacacaagcggc
aggaagaaactcgtcaaagagtttctggatttcaagcagctaatgcttaaatttgatcct
gaagaaccagacgacgatggtggcaacgatgccgccgataccagcggcggtggaaagcac
agtgcggagaatcaacaagcagcgaggataccgccgcataccgaggctaatgacgctaga
acaatagccgatggtaccgtcgcgggaaatgcaaccttggcaattgcggctggtcaacag
caatatcagttaccgtcgcaatcgaatctgactgctcccacggaccacccaaacaattcg
atgaactcgctgccggctatgccagcagcggcggcggcggcgacgacaacgacgacgacg
acgacaggcgcagcggtaccaacgacgacaccacgggtgccgaaattgacgatacacgcc
catccagacgcgagggagtcgcataggaaacaccgcgcacacaagacggacaagtcagtg
aggaaacataaaaaaaagaagaggagaagaatttccgacagcagtgacagtggcgaagac
tacagtgaccctgactttttagtgtga
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integrated database retrieval system