Cardiocondyla obscurior: 139113357
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Entry
139113357 CDS
T10704
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cobs03041
]
139113357
Enzymes [BR:
cobs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139113357
Spliceosome [BR:
cobs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139113357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
KH_KhpA-B
ResIII
KH_2
KH-I_KHDC4-BBP
CMS1
Poty_PP
Motif
Other DBs
NCBI-GeneID:
139113357
NCBI-ProteinID:
XP_070530568
LinkDB
All DBs
Position
LG02:932150..936259
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AA seq
649 aa
AA seq
DB search
MSDAWDENNTMPPGKHDQNYDHRRENRRERDHQFYRRPNRFGDNRDNTTSRHQNFNNDSS
RRSNNNSSNSTNGLVIYIDTSNIGKLIGRGGSKIKALQDESNAIIKIDKELCENEQTAVT
LIGPDEAQQRAKSLIEELLNNKYNKQEDVHSTQAMSEKKDIDWTNFDWTKANSEYESRQK
EKWAALPPIIKNFYKEDPIVANMSASKVAHVRQTNNNIQVRYVFENEGSAEMKIPNPVET
FEQAFQAYPDILTEIRKQKFVKPSPIQCQAWPILLSGQDLIGIAQTGTGKTLAFLLPALI
HIDGQVTPRDERPGPNILVMAPTRELALQIEKEVGKYSYHGIKAVCVYGGGSRKAQIDMV
SKGVQIVIATPGRLNDLVQAGILNVSAVTYLILDEADRMLDMGFEPQIRKTLLGVRPDRQ
TVMTSATWPQGVRRLAQSYMSNPIQVCVGSLDLAAVHSVTQKIYIINEDEKIDMMHQFIQ
EMDPTDKVIVFFGKKSKVDDISSDLALSNIDCQSIHGDREQADREQALEDLKAGTVPILL
ATDVASRGIDIEDITHVLNFDFPRDIEEYVHRVGRTGRAGRTGESITFMTRQDWHHAKGL
INILEEANQEVPEEVYKMAERYEVWKKKKDIDQSAFGRGNRYNGRGYRT
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgcatgggacgaaaataataccatgccaccagggaagcacgatcagaattat
gatcacaggagagaaaataggcgagaaagagaccatcagttttatagacggccgaacaga
tttggagataacagggataatactacctctagacatcaaaattttaataatgattcaagt
agaagaagtaataataatagttcaaatagcacaaatggacttgtcatatacattgatacc
agcaacattgggaaactgattggaagaggtgggagcaagattaaagctttacaagatgaa
agtaatgccataattaagattgacaaagaactttgtgaaaatgaacagactgctgtaaca
ctaattggcccagatgaagcacaacaacgagctaaaagcttgatagaggaattattaaac
aataaatataataaacaagaagatgtacattcaacacaagctatgtctgaaaaaaaagac
attgattggactaattttgattggactaaagctaattcagaatatgaaagtcgtcagaag
gagaaatgggcagctttacctcctattataaaaaatttttacaaagaagatccaatcgtt
gctaatatgtcggcatctaaagtagctcatgttagacagactaacaataatatacaagtt
cggtatgttttcgagaatgaaggttctgctgaaatgaaaataccgaatcctgttgaaact
tttgaacaagcctttcaggcttatccagatatccttactgaaatacgaaaacaaaagttt
gtaaaaccaagtcctatacaatgccaagcatggcctattttgctgagtggtcaagatctc
attggaatagcgcaaactggaacaggaaaaactcttgcctttttactccctgcattaatt
catatcgatggccaagtaactccacgcgatgagcgtcctggaccaaatattcttgttatg
gcaccgactagagaacttgcactacaaattgaaaaggaagtaggaaaatactcttaccac
ggtattaaagcggtgtgtgtatatggtggcggaagtcgcaaagcacaaatagatatggta
tcgaaaggcgtacaaatagtaatagcaactcctggaaggctaaatgatttagttcaagca
ggaatattaaatgtgtctgctgtaacatatcttatacttgatgaagcagatcgtatgctg
gacatgggttttgaaccacaaattcgtaaaactctcttaggagtacgaccagatagacaa
actgttatgacaagcgctacatggcctcaaggtgtgagacgtttagctcaatcatatatg
agtaatccaattcaagtatgtgttggatcacttgatttagcagctgttcattctgtaaca
cagaagatttatataattaatgaagacgagaaaatcgatatgatgcatcagtttatccaa
gaaatggaccccactgacaaggtgatagtattttttggtaaaaaatccaaagtagacgat
atctctagcgatctggcattatcaaatattgattgtcagagtattcacggcgatagagaa
caagcagatagagagcaagctttagaagatttaaaagctggaacagttccgattcttctc
gcgactgacgtggcgagtcgaggaattgatattgaagacattacgcacgtgttaaatttt
gattttccgcgggatatagaagaatacgttcacagagtcggtcgcactggacgcgcaggt
cgaacaggcgagagtattacttttatgacgaggcaggattggcatcatgccaaaggactg
attaacattctagaagaagcaaatcaagaagtacctgaagaagtatacaaaatggctgaa
agatacgaggtatggaaaaagaaaaaagacatagatcaatctgcatttggaagaggcaac
agatataacggtagaggttatcgtacttaa
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