Cardiocondyla obscurior: 139113682
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Entry
139113682 CDS
T10704
Symbol
Sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139113682 (Sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobs03021
]
139113682 (Sf3b3)
03041 Spliceosome [BR:
cobs03041
]
139113682 (Sf3b3)
03036 Chromosome and associated proteins [BR:
cobs03036
]
139113682 (Sf3b3)
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
139113682 (Sf3b3)
Spliceosome [BR:
cobs03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
139113682 (Sf3b3)
Complex B
139113682 (Sf3b3)
Complex C
U2 SnRNP specific factors
139113682 (Sf3b3)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
139113682 (Sf3b3)
TFTC complex
139113682 (Sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
139113682
NCBI-ProteinID:
XP_070531097
LinkDB
All DBs
Position
LG03:complement(11337981..11347475)
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AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNSFEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PQLYIACGRGPRSTLRVLRHGLQVTEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKEADNSEDAAPQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSW
LSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRRFAIHADSAHLVIIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAAVARELAE
AFLSEESNESIFGAPRAGPGLWASMLRIMAPTTGQTFEVHRFEQNLAALCLCLVKFANQG
DQLFLIVGVAKEFQLNPRVSNGGFLYTYKVNTECTSIELLHKSPLDEVPLAICPYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPHAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWITTTCVLDYDTVATADKFGNIGVIRLATGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPAKQKSISGDLERT
PSEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtataatttgacccttcaacgtgccacgggcatcacgcacgcggtgcatggt
aacttttccggtagcaagatgcaggagatccttgtctctcgcggcaagtcgttggagctt
ctacgcccggacccgaatacaggaaaagtgcacactttgctgactgttgaggttttcggt
attatccggtctctcatggcgttcagattgaccggtgggacgaaggattacattgtcgtt
ggctcggattccggacgtatagtgatattggaatatattcctgccaagaattcttttgag
aaggtacatcaagaaactttcggcaaaagtggatgtaggcgcattgtgcctggccagtat
cttgctattgatccaaaaggaagagcagttatgataggtgctattgaaaagcagaaacta
gtatatattctcaacagagacgccgaagctcgtttgacgatctcttctccattagaagca
cataaaagtaatacactggtatatcacacagttggcgttgacgttggtttcgagaatcct
atgtttgcgtgtttagaaatcgattatgaggaagctgacagcgatcccacgggtgacgca
gcagtgaaaactcaacagacgcttacgttatacgagctcgatctcggtctgaatcatgta
gtacgaaagtacagcgaaccattagaagaacacgccaactttctcgtttctgttcctggt
ggtaacgatggtccgagtggcgtgcttatttgttccgaaaactatctcacgtacaagaat
cttggagatcaacatgatatacgttgtccgattccgcgacgtcgtaacgacttggacgat
cctgagagaggaatgatattcgtgtgctcggccacgcataaaacgaagagcatgtttttt
ttcttggcgcaaactgagcagggcgacattttcaaaattaccctcgaaacagacgaggat
atggttaccgagattaagctaaaatacttcgacacggtacctgtagcagcaagtatgtgt
gtcttgaaaactggattcctgttcgttgcttctgaattcggcaaccattatttgtatcaa
atagcgcacctcggagacgacgacgacgagcccgaattcagttcggcaatgccattggaa
gagggtgacactttcttctttgctccacgaccgcttcgaaatctggtactggtcgatgaa
atggacagtctttcgcctataatggcttgtcaggtagcagatttggcgaatgaagacacg
ccgcaattatacatcgcttgtggacgaggaccgcgatctacgttgcgagtgttacgccac
ggtctccaagttaccgagatggccgtgagcgagctgcctggtaatccaaatgccgtatgg
actgtaaaaagaagaatcgatgaggaatatgatgcatacatcatagtgtccttcgtgaac
gccacacttgtactcagtatcggtgaaactgtcgaggaagtgacggattcaggttttctt
ggtacaacaccgactttaagttgctccgctttgggcgaggatgcgttggtgcaggtatat
cctgacggtatacgtcacatccgagcggataagcgtgtcaacgaatggaaggcacctggc
aaaaagactattgtaaaatgtgcggtcaatcaacgtcaagttgtcattgcccttactgga
ggagaactagtttacttcgaaatggatcctactgggcaattgaacgagtatacggaaagg
aaaaagatgccttcggaagtaatgtgtatggctctcggaaatgtagcagtaggcgaacag
cggtcgtggtttttagctgttggtttgcaagacaataccgtaagaattatatctttggat
ccttcggattgtttagcgcctcgaagcatgcaggcattgccagcggctgcggaaagttta
tgcatcgtggaaatgggcgcaaaagaggctgacaattccgaggatgcggcgccacaacaa
tctagtttgtacctgaatataggcttgcaaaatggtgtattgctcagaacagtattagat
ccgatttccggtgatctcgcagacacgagaacacgctacttaggctctcgtccagtgaaa
ctctttagaatacgaatgcaaggaaatcaagcggtgttagcaatgagcagccgatcttgg
ctgagttattaccatcaaaatcgttttcacttaacccctttgtcgtatgaaagtttggaa
tttgcgtcaggttttagttccgagcagtgtccagaaggtattgtcgctatttcgacaaat
acattgagaattttagcactagaaaaattaggagctgtgttcaaccaagtgagcttccca
ctggaatatacaccgaggaggtttgcgattcacgccgattccgcacatctagtgatcatc
gagactgagcacaacgcatacacggaggaaacgaagcaacagagaagattgcaaatggca
gaagagatgcaagaggcagccggtgccgaggaagccgcggttgctcgagagctggcggaa
gcatttctgtcggaggaatcgaacgaatcaattttcggagccccgcgagcgggtccgggt
ttgtgggcctctatgctgagaataatggcaccaaccacaggacaaacgtttgaagtgcat
cgtttcgaacaaaatctagctgcattatgtctttgcctggttaaatttgctaatcaaggt
gatcagctatttctcatagtaggagttgcaaaagaatttcaattaaatcctagagtcagc
aatggcggttttctctatacatacaaagtaaataccgagtgtactagtatcgagctactt
cacaaatctccattagatgaagtaccattggctatttgtccatatcagggtcgagtatta
gtaggagtgggtagaatgttacggctttacgacatgggtaaaaagaaattactacgtaag
tgtgaaaacaagcatataccccacgccgtcgtatcgatcaatgcaattggtcaacggatc
tacgtcagcgatgtacaagaatctgtgtacgctgtaagatacaagcgccaggaaaatcag
ttaatcgttttcgcagacgatacacatcctagatggattacgacgacgtgcgtattagat
tacgataccgtcgctactgccgataaatttggaaacataggtgtgatacgattagcaact
ggtattaatgacgacgtagatgaagatcctacaggaaataaggctttatgggatcgggga
ttgttgaatggcgctagtcagaaagcagatacagtggcctgttttcacgtcggcgagaca
gtgatgtcgttacaaaaggcgactctcataccaggcggttctgagagtctggtttataca
actttgagcggaacggtaggcgtcctcgtgccgtttacaagtcacgaagaccatgacttc
tttcaacatttggagatgcacatgcgatcggaacatccccctttatgtggcagagatcat
ctatcttttcgctcgtattattaccctgtaaaaaatgtcatcgatggcgatctatgtgaa
cagttcaactcgatcgaacccgctaagcaaaagagtatttctggagatcttgagagaaca
ccatccgaagtatcgaagaagttggaagatatacgtacgcgatacgctttctaa
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integrated database retrieval system
