Cardiocondyla obscurior: 139113738
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Entry
139113738 CDS
T10704
Symbol
Rfc4
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03030
DNA replication
cobs03410
Base excision repair
cobs03420
Nucleotide excision repair
cobs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139113738 (Rfc4)
03410 Base excision repair
139113738 (Rfc4)
03420 Nucleotide excision repair
139113738 (Rfc4)
03430 Mismatch repair
139113738 (Rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobs03032
]
139113738 (Rfc4)
03036 Chromosome and associated proteins [BR:
cobs03036
]
139113738 (Rfc4)
03400 DNA repair and recombination proteins [BR:
cobs03400
]
139113738 (Rfc4)
DNA replication proteins [BR:
cobs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
139113738 (Rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
139113738 (Rfc4)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
139113738 (Rfc4)
DNA repair and recombination proteins [BR:
cobs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
139113738 (Rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
139113738 (Rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
RCF1-5-like_lid
AAA_22
AAA_lid_RFC1
Viral_helicase1
nSTAND_NTPase5
AAA_16
AAA_11
Rad17
AAA_19
AAA_18
Mg_chelatase
nSTAND3
AAA_assoc_2
RuvB_N
AAA_24
DEAD
MeaB
MipZ
ABC_tran
NTPase_1
RNA_helicase
DNAX_ATPase_lid
ResIII
IstB_IS21
AAA_28
AAA_5
AAA_7
AAA_25
MCM
AAA_3
ATPase_2
SRP54
AAA_30
SLFN-g3_helicase
bpMoxR
FtsK_SpoIIIE
AAA_23
DUF2247
CbiA
Gp44_lid
Motif
Other DBs
NCBI-GeneID:
139113738
NCBI-ProteinID:
XP_070531209
LinkDB
All DBs
Position
LG03:8868812..8870955
Genome browser
AA seq
340 aa
AA seq
DB search
MEIEILPSTSSDNGRIKERDSKITNLPWVEKYRPQVFSDIVGNEDTVSRLAVFAQYGNTP
NIIIAGPPGVGKTTTILCLARTLLGSAFKEAVLELNASNERGIDVVRNKIKMFAQKKVNL
PKEKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNNTEKIIEPIQSRCAMLRY
GKLTDDQILAKVIEVCEKENVSYTDDGMQAIVFTAQGDMRQALNNLQSTFNGFNHVNLEN
VFKVCDQPHPLIVKEMLDDCMKGNVSKACTVMDYFWKLGYSAEDIINTVFRVCKNHVIDE
KLKLKFVKEIGMTHMGVVEGINGLLQLHALVARLCRTSTS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgaaattttaccgtcaacgagcagcgataatgggagaattaaagaacgagat
agtaaaattacaaatttaccgtgggttgaaaaatacaggcctcaagtattttctgacatt
gttggcaatgaagatactgtgtctagattagctgtttttgctcagtatggaaatactcca
aatataattattgctggtccacctggagtaggcaaaactacaacaattttatgtttagct
cgtactctattagggtcagcattcaaagaagctgtacttgaattaaatgcttcaaatgag
agaggaatagatgtagtcagaaataaaatcaaaatgtttgctcagaaaaaggtaaatctt
ccaaaagaaaagcataaaatcattattttagatgaagctgatagtatgactgatggtgca
caacaggcactacgtcgaacaatggaaatttatagcaacacaactagatttgctcttgca
tgtaataatacagagaagattattgaacctatacaatcgcgttgtgctatgttaagatat
ggaaaattaacagatgaccaaattttggccaaagttatagaagtttgtgaaaaagaaaat
gtttcttatacagatgatggtatgcaagcaatagtatttacagctcaaggggacatgaga
caggccttgaataatttacagtctacatttaatggatttaatcatgtaaatttagaaaat
gtattcaaagtatgtgatcaacctcaccctttaattgttaaagaaatgctggatgattgt
atgaagggcaatgtttcaaaagcatgcacggtaatggattatttttggaaattgggatat
tctgcggaagatataatcaataccgtattcagagtttgtaaaaatcatgtcatagatgaa
aaattaaaattgaaatttgttaaggaaattggaatgacacatatgggagtagtagaaggt
atcaacggtttgttacagttgcatgctttagtggcaagactttgccgtacaagcacatcg
taa
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