Cardiocondyla obscurior: 139113844
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Entry
139113844 CDS
T10704
Symbol
Ranbp21
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139113844 (Ranbp21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cobs03016
]
139113844 (Ranbp21)
03036 Chromosome and associated proteins [BR:
cobs03036
]
139113844 (Ranbp21)
Transfer RNA biogenesis [BR:
cobs03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
139113844 (Ranbp21)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
139113844 (Ranbp21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
DUF4551
Motif
Other DBs
NCBI-GeneID:
139113844
NCBI-ProteinID:
XP_070531368
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All DBs
Position
LG03:97232..106086
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AA seq
1214 aa
AA seq
DB search
MEFGVGDVAQISAELARVVEMMMSPGITQPQRLEMYNACERFKESSPLCAQCGLYLAQKS
PDRSSVVRHFGLQLMEHCVKYRWTQISQSEKIFIKENAMKLLQEGTQPLLQEEAHIKDAL
SRVVVEMIKREWPQQWPTLLAELSQACTQGESQTELVLLVFLRLVEDVALLQTLESNQRR
KDIYQALTTNMAEIFSFFLRLMEQHFSEFQKKSALGQTSEAAAHSKVVQVVLSTLTGFVE
WVSINHVMAEDGRLLQILCLLLGDPIFQCSAAECLLQIVNRKGKAEDRKQLMILFSEEAL
RFIYTAATAPPPLAGPTNFHENHYLFLKKLTQVLTGMATQLCALWGKDDASSIRPTHFNL
FLDTVLTFTMYPSLTLTHLANAIWVMLFKHEQIKTDSLLLTYVPKYVEHTAPKLIRVTYP
HGRQSNGMTTYCLVDYDSEEEFNVFLHRFRMDLLEGFRHATMVAPLVTFTYVQQWLTAKI
TKGMANLQYKSDPNDREYLEWEALAQALDSVVSRILLINERPSVQTGLQLLELCLGYSPQ
DPWLLSALLSCISALFVFLSMSTGSMTMPGVAILPRVLEKIFAALVFEAPGENERNRSRA
AKTVRRHAASLMVKISLKYPLLLLPVFDQIHTMVRSLTQEPSPLSRMESVMLYEALLLIS
NHFCDYERQTRFVTEVIGDASTKFIAMGTEWFKGPLELMQFVGLDRPPVENMMEDPVRRN
RSDLMMCICTVLSVVKRCSIPEDPDRAARGGFVAALSESGNPVYRNPATPHVIPILPTLF
ALLRTMNGLFSHAALAALSEGYKNAHGLLESEKANLLGVNVTNDNNSETDQALSTSLNRM
QSFLSTIHDQCYHMLGSGCHMIGRDFYQLPGLAPALLNSVFSNMEAIPDYRLRPIIRVFM
KPFIYSCPPAFYESVLVPVLAHVSTHMCQRLSAKWQYIARLYESGLDEENTDTQEVIDDM
LNRNLTRDFVDVLKVALVGGAASDATPPDSMEQDSGGMAVDPPISRGNSIVAEVVSELGT
FVLRHPSTCHSVVLCVLGALAWNDSNASLKATMLTGPVVRALAADGSLTPAMAAHIMVAV
LQGLQLHGQHEANQGSLITLGAQVYECLRPKFPNIIEVMQQIPGVNPADLQRFDEKMSVV
STKGNKVEKGKKDLFKKITNQLIGRSVGQLFRKEVKIDNLPRIEVSSNSHPVRVDEISKN
SEDTGITALFAGSS
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggagtttggagtgggcgatgtcgcccaaatatcggcagaactggctcgagtggttgaa
atgatgatgtcacccggtataactcagccgcaacgtttagaaatgtacaatgcatgcgaa
aggtttaaagagtcttcaccattgtgcgcgcaatgcggtctctatttggcacaaaagtcg
cccgataggagctcagtggtgcgccactttggtctacaattaatggagcactgtgtaaaa
tatcgatggacacagatctcacagtcggaaaaaatttttatcaaagaaaatgcgatgaaa
ctacttcaagagggaactcaaccattattgcaggaagaagcgcatataaaggatgctctg
tcgcgcgttgtagtcgagatgataaaacgagaatggcctcagcaatggcccaccctgttg
gctgaactcagccaggcttgtacacagggcgagagtcaaaccgaattagtcttgttggta
ttccttagattagtggaggatgtagcgcttcttcaaacacttgaatctaatcagagaaga
aaagatatatatcaggcattgactacaaatatggcagagatctttagcttctttctgaga
ttaatggagcaacacttttcggaatttcagaagaaaagtgccttaggacagacgtccgaa
gccgcggcacatagtaaagttgttcaagtggtactgtcgacattaactggatttgtcgag
tgggtctctataaatcatgtgatggccgaagacggaagattattacagatactgtgcctc
ctactaggagatcctatatttcaatgttcggcagctgaatgtctgcttcagattgtcaat
cgtaaaggcaaagctgaagatcgaaagcaattgatgatcctgttttcagaggaggcttta
agatttatttatacagcggccactgctccaccgcctcttgctggacctacaaattttcat
gaaaatcattacttatttctgaaaaagctcacacaagtattgactggcatggcgacacaa
ctttgcgctttatggggaaaagatgatgcttctagtatacgaccgacgcatttcaatctt
tttctagacactgtgcttacgttcactatgtatccgagtctcacactcactcatttagcg
aacgcgatttgggtaatgttatttaaacacgaacagattaagacagattcgctgttgctt
acgtatgtacccaaatacgtagagcataccgcacctaaattgatccgtgttacataccca
catggcagacagagcaacggcatgactacgtattgtcttgttgattatgactctgaggag
gaatttaacgtttttctgcatcgctttagaatggatttattagaaggatttagacacgca
actatggtagcgcctttagtaacatttacatacgtacaacaatggttaactgcaaaaatt
actaaaggtatggcaaatttgcaatataaaagtgatccgaacgatcgagaatacctcgaa
tgggaggctcttgcgcaggcattagactctgtcgtgtctagaattttgctaattaatgag
cgtccgagtgtacaaactggtttacaactattggaactctgtctgggttactcaccacaa
gatccttggcttctgtccgctttgctgtcttgcataagcgcgttattcgtatttctgtcg
atgtcgactggctcgatgaccatgccaggcgtcgctatcctgccacgtgttcttgaaaaa
atctttgctgcattggtattcgaggcacctggtgaaaacgagcgcaatcgctcacgagca
gccaaaactgtgcggcgacatgcggctagtcttatggtgaaaattagcctgaaatatccg
ctgttgttgctgccagtattcgatcagatccatacaatggtacgcagcttaactcaggaa
ccaagcccgttgtctcgaatggagagtgtcatgctatacgaagcattactccttatctcg
aatcatttctgtgattacgagagacaaactcgatttgtcacagaggtaattggtgatgca
tccaccaaatttatagcaatgggcacggaatggtttaaaggaccattagagcttatgcaa
tttgtcggactagacagaccgccggtggaaaacatgatggaagatccagtcagacgtaat
cgcagcgatctcatgatgtgtatttgtacagtactgagcgtagttaaacggtgctcgatc
ccagaagatcctgatcgcgcggctaggggcggcttcgtggccgcgctcagcgaaagcggt
aatccagtatatcgaaatccagcaacacctcacgttatcccgattttgccaacacttttc
gcgttactgcgaacaatgaatggtctttttagtcatgctgctcttgccgctttatccgag
ggctacaaaaatgctcatggacttttggaatcggagaaagcaaatcttctaggcgtgaat
gtaaccaatgacaataatagtgaaacggatcaggctttaagcacttctctaaatcgaatg
caatcatttttgagtacaattcatgatcaatgctatcatatgttaggtagtggttgtcac
atgattggtcgcgatttttatcagttgcctggacttgcaccagccttgttaaattctgtt
ttttcgaatatggaggcgattccagattatagattacggccgattatacgtgtgtttatg
aagccgtttatatattcatgcccgccagctttttatgagagcgtactagtacctgtattg
gctcacgtatccacacacatgtgccaaagattaagcgcgaagtggcagtacatagcgcgt
ctttacgaatcgggtttagacgaagagaacactgatacacaagaagtcatcgatgatatg
ctgaacagaaatttaaccagagactttgtagacgtgttaaaagtggctcttgttggcgga
gccgcaagcgacgctactcctccggattccatggaacaggacagtggaggaatggcggtg
gatccacctatttcacgaggaaacagcattgttgctgaggtcgtcagcgagcttggaact
tttgttttgcgtcatccatctacttgtcacagcgtcgtcttatgcgtattaggagcgctc
gcatggaacgattcaaacgcaagtcttaaggctacgatgttgactgggcctgtagttcga
gcattggcagctgacggtagtctcactcctgctatggcagcgcacatcatggtcgctgtt
cttcaaggtttacaactacatggtcaacacgaggccaatcaaggttcccttatcactctg
ggcgcacaagtttatgagtgtctcagacctaagtttccaaacattatcgaagtaatgcag
caaattccgggagtcaatcctgctgacttacagcgcttcgatgaaaagatgtcagtggtc
agcacgaaaggcaataaggttgagaaaggcaagaaggatctcttcaagaaaattactaat
cagcttatcgggagaagcgtaggacaattattccgtaaggaagtcaaaatagacaattta
ccacggatagaggtatccagtaattctcatccggtgcgcgtggatgaaatctcaaaaaat
tctgaagacacgggaataacagcactgttcgctggatcttcgtag
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