Cobetia sp. UIB-001: HA399_13230
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Entry
HA399_13230 CDS
T11752
Name
(GenBank) RNA-binding transcriptional accessory protein
Organism
cobu Cobetia sp. UIB-001
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Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
OB_PDCD11
HHH_6
DUF22
T2SSK
Motif
Other DBs
NCBI-ProteinID:
XKE42657
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Position
complement(3166460..3168883)
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AA seq
807 aa
AA seq
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MDATATDATTSRPAPTLSPAATTRRIQQALAGELGVREEQITATVELLDGGATVPFISRY
RKEATGGLDDTQMRQLEERLRYLRELEERRQVVLESIAEQNKLSATLERDVLAADSKQRL
EDLYLPYRKKRRTKAQIAREAGLEPLADALLADPTLEPEAQAAGFVAADKDVADTKAALD
GAKQILMERFAEDAALVGRLRQRLWDDGILSARVMKGKEQEGAKFSDYFEHDEPLHKAPS
HRALAMLRGRNEGVLSLALKLEGEDDLPRHPMEGAIAAHFSIEDQGRAADRWLKEVVRWT
WRVKLYTHLESELIGRLRERAEQEAIQVFADNLKDLLLAAPAGPKATLGLDPGLRTGVKV
AVVDATGKYVDQATIYPHAPHNRWDASVAELVKLVERHDVELIAIGNGTASRETDKLAAD
VLTRLSGRRLQKVMVNEAGASIYSASEYAAREFPDLDVTIRGAVSIARRLQDPLGELVKI
EPKSIGVGQYQHDVSQVQLGRSLEAVVEDCVNGVGVDLNMASSALLSRVAGLNTTLAENI
VAHRDANGRFASRQELLKVSRLGPRTFEQCAGFLRIASGKNPLDASAVHPEAYPLVERIA
RAHGRDLPSLLGDSAFLRTVKPTEFTDEHFGLPTVTDILRELDKPGRDPRPEFRFAEFKE
GVETLKDLEPGMKLEGVVTNVTHFGAFVDIGVHQDGLVHISALSQKYVADPREVVKAGDI
VSVKVMEVDIPRARIALSMRMSDTPAEKGAAGEARRGAEGGRGGRSQGGGGRQDRGGRGS
NSGASGGAAPANNAMAAALLNARKSKS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggacgctactgcaactgacgctaccacctcccgtcctgcaccgacgctgtcgcccgct
gccaccactcgccgcattcaacaggcgctggccggtgagcttggggtgcgcgaagaacag
atcaccgccaccgtcgagctgctggatggcggcgcgaccgtaccgttcatctcgcgttac
cgcaaggaagccaccggcgggctcgatgatacccagatgcgtcagctcgaagagcgcctg
cgctatctgcgtgagctggaggagcggcgtcaggtcgtgctcgagtcgatcgccgagcag
aacaagctgagcgccacgcttgagcgggatgtgctggccgccgacagcaagcagcgtctg
gaagatctctacctgccgtatcgcaagaagcgccgtaccaaggcccagatcgcgcgtgaa
gcggggcttgagcctctggccgatgcgctgctcgcggacccgacgctggagccggaggct
caggcggcaggtttcgtcgctgccgacaaggacgtggccgataccaaggcggcgttggat
ggcgccaagcagattctgatggagcgcttcgcggaggacgccgcgctggtcggtcgcctg
cgtcaacgtctgtgggacgacggtatcctcagtgcgcgcgtcatgaagggcaaggagcag
gagggcgccaagttctccgattacttcgagcatgacgagccgctgcacaaggcgccctcg
caccgtgcgctggccatgctgcgtggtcgcaacgaaggcgtgctgagcctcgcgctcaag
ctggaaggcgaagacgacctgccgcgtcacccgatggaaggcgccatcgcggcgcatttc
tccatcgaggatcaagggcgcgccgcggaccgctggttgaaggaagtggtgcgctggacc
tggcgcgtcaagctctatacccatctggaaagcgagctgatcggccgcctgcgcgagcgc
gccgagcaggaggccatccaggtcttcgccgacaacctgaaggacctgctgctggcggcg
ccggcggggcccaaggccacgctgggtctggacccggggctgcgtaccggcgtcaaggtc
gcggtggtggatgccaccggcaagtatgtcgatcaggccaccatctatccgcatgcgcca
cacaatcgctgggacgcctcggtggccgagctggtcaagctggtcgagcggcatgacgtc
gagctgatcgccatcggcaacggcaccgcctcgcgcgagaccgacaagctggccgccgac
gtgctgacgcgcctgtccggccgtcgtctgcagaaggtgatggtcaacgaggccggtgcg
tccatctactccgcctcggaatatgcggcgcgtgaattcccggacctggacgtgaccatc
cgcggcgcggtctccatcgcccgccgcctgcaggacccgctgggtgagctggtcaagatc
gagcccaagtccatcggcgttggtcagtaccagcacgatgtcagtcaggtgcagctgggg
cgcagtctggaagccgtcgtcgaggattgcgtcaacggtgtcggcgtcgacctcaacatg
gcctcaagcgcgctgctgtcacgtgtcgcgggtctcaacaccacgcttgccgagaatatc
gtcgcgcaccgggatgccaatggccgtttcgcttcgcgccaggaattgctcaaggtcagc
cggctgggcccgcgcaccttcgagcagtgtgccggctttttgcgcatcgcctccggcaag
aatccgctggatgccagtgccgtccacccggaggcctatccgctggtcgagcgtatcgcc
agggcgcacgggcgtgatctgccgagtctgctgggtgacagcgccttcctgcgcaccgtg
aagccgacggaattcaccgatgagcacttcggcctgccgacggtgaccgacatcctgcgt
gagctggacaagccgggacgtgacccgcgccccgaattccgcttcgccgagttcaaggaa
ggggtcgagaccctcaaggacctcgagccgggcatgaagcttgagggcgtcgtcaccaac
gtgactcatttcggagccttcgtggacatcggcgtgcatcaggacggcctggtacacatc
tctgccctgtcgcaaaagtatgttgccgacccacgcgaggtggtcaaggcgggcgacatc
gtcagcgtcaaggtgatggaagtcgacatcccgcgcgcgcgcatcgcgctgagcatgcgc
atgagcgatactcccgccgagaaaggtgcggcaggcgaggcgcgacgcggcgcagagggc
ggtcgcggtgggcgctcgcaaggtggcggtggccgtcaggatcgtggcggtcgcggcagc
aattctggcgcgagcggcggcgcggcaccggccaacaatgcgatggcagcagcactgctc
aatgcgcgcaagtcgaaatcataa
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