Cobetia sp. UIB-001: HA399_13520
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Entry
HA399_13520 CDS
T11752
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
cobu Cobetia sp. UIB-001
Pathway
cobu00020
Citrate cycle (TCA cycle)
cobu00480
Glutathione metabolism
cobu00720
Other carbon fixation pathways
cobu01100
Metabolic pathways
cobu01110
Biosynthesis of secondary metabolites
cobu01120
Microbial metabolism in diverse environments
cobu01200
Carbon metabolism
cobu01210
2-Oxocarboxylic acid metabolism
cobu01230
Biosynthesis of amino acids
Module
cobu_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
cobu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HA399_13520 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
HA399_13520 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HA399_13520 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HA399_13520 (icd)
Enzymes [BR:
cobu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
HA399_13520 (icd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Iso_dh
tRNA_synt_1c_R1
Motif
Other DBs
NCBI-ProteinID:
XKE42711
LinkDB
All DBs
Position
complement(3239305..3240567)
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AA seq
420 aa
AA seq
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MGFQKIVVPEGGAKITANSDNTLNVPNNPIIPFIEGDGIGVDVTPAMKIAIDAAVDKAYG
GERKIHWMEVYAGEKATHVYDADTWLPEETLEAVKDYVVSIKGPLTTPVGGGIRSLNVAL
RQKLDLYTCLRPVRWFTGVPSPVKKPADVDMVIFRENSEDIYAGVEWKAGTPEADKVIKF
LREEMGVTNIRFPENCGIGVKPVSEEGTKRLVRQAVQYTIDNDRESLTLVHKGNIMKFTE
GAFKDWGYEIVKDEFGGELLDGGPWMTFKNPNNGKDIVVKDVIADAMLQQILLRPAEYDV
IATLNLNGDYLSDALAAEVGGIGIAPGANLSDTVAMFEATHGTAPKYAGQDKVNPGSVIL
SAEMMLRHMGWVEAADLVLKGVEKAIAKGEVTYDFHRLMDDAKLLKCSEFGQAVADNMDA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggggttccagaagattgtcgtcccggaaggcggtgccaagatcaccgcaaattccgac
aataccctcaacgttccgaataatccgatcatcccgttcatcgaaggcgatggtatcggt
gtggacgtgactccggccatgaagattgccatcgacgctgctgtcgacaaggcctatggc
ggcgagcgcaagattcactggatggaagtctacgccggtgaaaaagccactcacgtttat
gatgctgacacctggctgccggaagagactctcgaggctgtcaaggattacgtcgtttcc
atcaagggtccgctgaccactccggtgggcggtggtattcgctccctgaacgtcgctctg
cgtcagaagctggatctgtacacctgcctgcgcccggtgcgctggttcactggtgtgccg
agcccggtcaagaagccggctgacgtcgacatggtcattttccgcgaaaactccgaagac
atctatgccggtgtcgaatggaaggcgggaacgccggaagccgacaaggtcatcaagttc
ctgcgtgaagagatgggtgtcaccaacatccgcttcccggagaactgcggtatcggcgtc
aagccggtctccgaagaaggtaccaagcgtctggtccgtcaggctgtccagtacaccatc
gacaacgaccgtgagtcgctgaccctggtgcacaagggcaacatcatgaagttcaccgaa
ggtgccttcaaggactggggctacgaaatcgtcaaggacgagttcggcggcgagctgctg
gatggcggcccgtggatgaccttcaagaacccgaacaacggcaaggacatcgtggtcaag
gacgtcatcgctgacgccatgctccagcagatcctgctgcgtccggcggaatatgacgtc
atcgccaccctgaacctgaacggtgactacctgtccgacgctctggcggcggaagtgggt
ggtatcggtatcgcgccgggtgccaacctgtccgacaccgtcgccatgttcgaagcgact
cacggtactgcaccgaagtacgctggccaggacaaggtcaacccgggctccgtcatcctc
tctgccgagatgatgctgcgtcacatggggtgggtcgaagcggctgatctcgtgctgaaa
ggcgtcgagaaggccatcgccaagggcgaagtcacctatgacttccatcgcctgatggac
gatgccaagctgctgaagtgctccgagttcggtcaggctgttgctgacaacatggatgcc
tga
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