Capnocytophaga ochracea: Coch_0076
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Entry
Coch_0076 CDS
T00961
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc03030
DNA replication
coc03430
Mismatch repair
coc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Coch_0076
03430 Mismatch repair
Coch_0076
03440 Homologous recombination
Coch_0076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coc03032
]
Coch_0076
03400 DNA repair and recombination proteins [BR:
coc03400
]
Coch_0076
Enzymes [BR:
coc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Coch_0076
DNA replication proteins [BR:
coc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Coch_0076
DNA repair and recombination proteins [BR:
coc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Coch_0076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
GIY-YIG
NDUS4
Motif
Other DBs
NCBI-ProteinID:
ACU91641
UniProt:
C7M4L1
LinkDB
All DBs
Position
99189..100517
Genome browser
AA seq
442 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITDIAIYQFNGHEITDQFISLINPERPIQEFVTKLTGINNKM
LRNAPKFYEVAKRIVEITTDCIIVGHNAAFDYRILQTEFRRLGYDFVRTTLCTVELSERL
IPNKESYSLGKLVRSLGIPVSDRHRASGDALATLKLFKYLLEKDTKKDIITTSVKQDIRL
EMASRHLKILDTLPETLGIFYMHNEEGKVIYIGKHKNIKQQVNRLFTSPSKRDRYLQRHT
YRVTYQETGNELIATLKRLEEIHLNLPKCNRRNPEKEINITYALTSHFNTKGYLCFSIEL
LSTQNEIITTFETKEQAEHFLNQITEEYHLNEVDFNNETVEEYNTRASEVLSKYGLVHRN
VAIVDKGRVIGEKSIILVVDGNIQGYAFFNLNFQLTQLEMLQNLITPLPNSLINRHLLHA
YLRRKPKVKVLNLSEQKPYHNE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaatactcgacatagaaaccacaggaggtaaatacaatgaagagggcattacc
gatatcgccatctatcagttcaacgggcacgaaataaccgaccagttcatatcattgata
aaccccgaacgccccattcaagagttcgttactaaactcacaggcatcaacaacaaaatg
ttgcgcaatgctcctaaattctatgaggttgccaaacgcattgtcgaaattaccaccgat
tgcattatcgtaggtcataatgccgccttcgattaccgcatcttgcaaactgaatttcgc
cgcttaggatacgactttgtccgtacaacgctctgcaccgtagaactatccgagcgactc
attcccaataaagaatcatatagtttaggtaagttagtgcgctccttaggtattcctgta
agcgaccggcatcgcgcctctggtgatgccttggctaccctaaaactctttaaataccta
ctcgaaaaggacaccaaaaaggatatcattactacctctgtcaagcaagatattcgttta
gaaatggcttctcgtcatctgaaaatactcgacactctccctgaaacattagggattttt
tatatgcataacgaagaaggtaaggtcatttacatcgggaaacacaaaaatatcaaacaa
caagtaaacaggctcttcacttctccttccaaacgcgatagatacttgcaacgtcatact
tatcgagttacttatcaagaaacaggcaatgaactcattgctactttaaaaaggttagaa
gaaatacacctcaacctcccaaaatgtaataggcgaaatcctgaaaaagaaataaatatc
acttatgcactcacttctcactttaatactaagggatatctttgtttttcaatagaatta
ttatccactcaaaacgaaattatcactacttttgaaaccaaagaacaagccgagcacttt
ttaaatcaaatcactgaagagtaccatttaaacgaagtagatttcaataacgaaaccgta
gaggagtataacacacgcgcctctgaggtactttcaaaatacggacttgtgcaccgaaac
gtagctattgtagataaaggtagagtaataggcgagaaaagcattattttagtagtcgat
ggcaatattcaaggctatgccttctttaatctaaatttccagcttactcaattagagatg
ttacaaaacctcatcactcctttacccaattcattaataaaccgtcaccttttgcacgct
tacttgcgtcgaaaacccaaagtaaaagtgctaaatctaagcgaacaaaaaccttatcat
aatgaataa
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