Capnocytophaga ochracea: Coch_0079
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Entry
Coch_0079 CDS
T00961
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Coch_0079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coc03400
]
Coch_0079
Enzymes [BR:
coc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Coch_0079
DNA repair and recombination proteins [BR:
coc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Coch_0079
RecFOR pathway proteins
Coch_0079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Pox_A22
DUF460
Motif
Other DBs
NCBI-ProteinID:
ACU91644
UniProt:
C7M4L4
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All DBs
Position
complement(102122..102667)
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AA seq
181 aa
AA seq
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MERIILGIDPGTTIMGFGLIQVERDTMKLLQLNELQLSKYSNHYLKLSVIFNRTLELIDT
YKPDELAIEAPFFGKNVQSMLKLGRAQGVAMAAGLSREIPITEYEPKKVKMAITGNGSAS
KEQVAKMLQQLLNIKELPKHFDATDGLAVAVCHFFNGGKSQKQQSYSGWDAFVKQNQDRI
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcattattttaggtatcgacccaggcactactattatggggtttgggcttatt
caggtggaaagagatactatgaagctcttacagctgaatgagcttcaacttagtaaatac
agcaatcactacttaaaactaagtgtgatttttaatcgcactttggagctgatagatacc
tataagcctgatgaattggctattgaagcgcccttctttggcaagaacgtacaatcgatg
ttgaaactcggaagagcgcagggagtggcgatggcagcggggctatcgcgtgaaattcct
attactgaatacgaacctaaaaaggtgaaaatggctattacgggtaatggtagtgcctcc
aaggaacaagtagctaaaatgcttcaacaacttctgaatataaaagaactccccaaacac
tttgacgcaactgacggtctggcggtggctgtttgtcacttttttaacggaggcaagtcg
caaaagcaacaaagttatagtggttgggacgcttttgtaaaacaaaatcaagaccgtata
ggttaa
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