Capnocytophaga ochracea: Coch_0195
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Entry
Coch_0195 CDS
T00961
Name
(GenBank) glycoside hydrolase family 2 TIM barrel
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc00052
Galactose metabolism
coc00511
Other glycan degradation
coc00600
Sphingolipid metabolism
coc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Coch_0195
09103 Lipid metabolism
00600 Sphingolipid metabolism
Coch_0195
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Coch_0195
Enzymes [BR:
coc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Coch_0195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
F5_F8_type_C
LacZ_4
F5_F8_type_C_2
Glyco_hydro_2
Glyco_hydro_2_N2
CHB_HEX_C_1
DUF5000
Fn3_assoc
BetaGal_ABD2
MKLP1_Arf_bdg
WxLIP_HBD
BVU_2266-like
Motif
Other DBs
NCBI-ProteinID:
ACU91758
UniProt:
C7M558
LinkDB
All DBs
Position
234056..238045
Genome browser
AA seq
1329 aa
AA seq
DB search
MKHYFRTVSTLLSLLLSPYLLAQHKPLGGFAYGTLSAPTGKEWESVEELSLNKEYPRAYF
FSFKDEKTATQVLPEHSPYWKSLNGQWQFHWCKTPEERPKDFYKPDFDASAWELIPVPSN
WNIQGIQKNGTLKYGVPIYVNQPVIFYHERKVDDWRKGVMRTPPKTWTTYEYRNEVGSYI
RDFEVPTDWDGREIFIDFDGVDSFFYLWINGQYVGFSKNSRNVASFDITKYLHKGKNKVA
VEVYRNSDGSFLESQDMFRLPGIFRTVALRSTPKVQIFNLNILTDTQNLTDWQLKVNAEV
RNLSPKAVKDYQVRYNVYEVSLYKDDVTSTATKGSIPLKAVAPNTIDKVSGTITVKNPKL
WSAEESHRYVLVAQLLDKKGKVVETVSSYFGFRKVEIKDTKAEDDAFGKAGRYYYLNGKT
IKFKGVNRHESHPAQGHVLTHQQMEEEVMMMKRANINHVRNSHYPPDPYWFYLCDKYGIY
LENEANIESHEYYYGKESLSHPKEWEKAHTARVTEMVEATYNSPAIVIWSLGNEAGPGQN
FVTAYNHLKTLDTSRPVQYERNNDIVDMGSNQYPSVAWVQGAATGKYDIKYPFHISEYAH
SMGNAVGNLADYWEAIESSNFLCGGAIWDWVDQAMYNYTKDGIRYQAYGGDFGDFPNDGQ
FVMNGIIFADRTVKPQYYEVQKVYQNIGVKKLNSFTFEIFNKGYFTDLSNYEGIWKLYKN
GVLVEERPFEVPSVMPQQKSSVTITSVTLDSNEEYYSIVEFRLKADTPWAKKGFVQAREQ
FLVQPATQKPSLSSVAKGEKLTLSKDKKTITGKDFSVTFDFDKGTIGTLRYGEHTIIANS
DLSLNAFRAFTNNDNWIYEQWFEKGLHNLHHKAIASSVKPNKEGGYTFFFTVESQAPNAA
KITGGASSGRNKIEELTHQKFGANDFKFTTNQIFTVYPDGSIELQASVVSNDASLVLPEL
GYLLKLPKQYENFTYYGRGKQDNYPDRKSGAFVGLYSGKVADEFVPFPKPQDMGQHQETR
WAALTNAQGAGAVFVGAEPLSVAALPYKAIDMTLAGHPYQLPESDGVYLQLNIGNTGLGG
HSCGPRPLLRDRLLATPHNFGFIIRPAKEDLQTITNVSASGEQPLSITRSKVGKVSISTA
NALATIYYSINNSKAQKYTLPFDLPNGGIVKAWFAGNETQKYTLTFGKAESTAMEVIFAS
SEEAGVGDAKHLVDGDPNTIWHSAYSVTVAKHPHWVDFDMGKVVNVKGFSFTQRTDSWSG
KVKDYQIQLSNDGKNWGEPVKVGAFKDVSSAQQVLLDKVTKARYVRFTALSDFYGEDFAT
GAEFMVILE
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgaaacactattttagaacagtaagtaccctgctaagtttactactctctccttattta
ttagcccagcacaagcctttgggtggttttgcttatggcactctctcagcccctacgggt
aaagaatgggagtcagtagaagaactctcgcttaacaaagagtacccccgtgcttatttc
ttctcgtttaaagacgaaaagacggctacccaagtattgcctgaacattctccctattgg
aaatctctcaatggacaatggcaattccactggtgcaaaactcccgaagagcgtcccaaa
gacttctataaacccgatttcgacgcttctgcttgggagttgattcctgtaccttctaac
tggaatattcaaggtatccaaaaaaacggtacgctcaaatatggagtgcctatctatgta
aaccaacccgtgattttctatcacgagcgcaaggtagacgattggcgtaaaggagtaatg
cgcactcctcctaaaacgtggacaacctatgagtatcgcaatgaggtaggctcttatatt
cgcgattttgaagtacctaccgattgggacggtcgtgaaatcttcatcgatttcgatgga
gtagactctttcttctacctttggattaatgggcagtatgtaggcttttctaaaaactca
cgcaatgtggcttcttttgatattaccaaatatctacacaaaggcaagaataaagtagcc
gtagaagtataccgcaattccgatggttcttttctcgaatcacaagatatgttccgccta
cctggtatattcagaacagtagccttgcgcagtactcctaaggtgcaaatctttaacctc
aacattcttacagatacccaaaacctcaccgattggcagttaaaagtcaatgccgaagtg
cgtaacctcagcccaaaagcagtcaaagattatcaagtgcgctataacgtatacgaagtc
tcattgtataaagacgacgttacctctactgctaccaaaggaagtattcccctaaaagcg
gtagctcctaacactatcgataaagtgagcggtacaataaccgtaaagaatcctaaacta
tggtcggctgaggagtctcatcgttatgtgctcgtagctcaacttttggataaaaaaggg
aaggtggtagaaacagtatcgtcttactttggctttagaaaagttgaaatcaaagatact
aaggctgaagacgatgctttcggaaaggcaggaaggtattattatctcaatggtaaaact
atcaaatttaaaggcgtaaaccgtcacgaaagtcaccccgcacaaggacacgtgctcaca
catcaacaaatggaagaagaggtgatgatgatgaagcgagccaatatcaaccacgtgcgc
aactctcactatccacccgacccttattggttttacctctgcgataagtatggtatttat
ttagaaaacgaagctaatatagagtctcacgagtattactacggcaaagaatcactttct
caccctaaagaatgggaaaaggcacatacagcccgcgtaaccgaaatggtagaggctacc
tataattcgcctgccattgtgatatggtcacttggtaatgaagcaggccctggtcagaac
tttgtaacggcttataatcacctcaaaacactcgatacttctcgccctgtacaatacgag
cgcaataacgacatcgtagatatgggctctaaccaatacccttccgtagcgtgggtacag
ggtgctgctacaggtaagtacgacatcaaatatccgtttcacatctcggaatacgcacat
tctatgggtaatgcggtagggaatctcgccgattattgggaggctatcgaaagctccaac
tttctatgcggaggtgctatctgggattgggtagaccaagcgatgtacaactataccaaa
gacggcattcgttatcaagcctatggaggtgattttggcgatttccctaacgatggtcag
tttgtgatgaacggcattatctttgccgatagaacagtaaaaccacagtactacgaagtg
cagaaagtgtatcagaatataggcgtgaaaaaacttaatagttttacttttgaaattttc
aataaaggctattttaccgatctttcaaactatgagggtatatggaaactctataagaac
ggtgtgcttgtagaagagcgtccttttgaagtgccttctgtgatgccacagcaaaaatca
agtgtgaccattacctctgtaaccttagatagcaatgaagaatattacagtattgtagaa
ttccgccttaaagcagatactccttgggctaaaaaaggatttgtgcaagctcgcgaacaa
ttcttagtgcaacctgctacccaaaagccttctctttcttctgtagccaaaggagaaaaa
ctcacccttagcaaagacaaaaagaccattaccggaaaagacttttcagtaacttttgat
ttcgataaaggtacgataggcacactccgctatggtgagcatactattattgccaacagc
gacctaagtctcaacgctttccgcgccttcaccaataacgacaactggatatacgaacaa
tggttcgaaaaaggattgcataacctgcatcataaagccattgcttcctctgtaaaacct
aataaagaaggtggttatacattctttttcacggtggaatcacaagcgcctaatgcagct
aaaataacagggggtgcgagctcagggcgcaataagatagaggaacttactcaccagaag
tttggtgcaaacgacttcaagttcactaccaaccaaattttcaccgtctatcccgatggc
tctatcgaactacaagccagcgtggtgtctaacgatgcctctttggtattgccagaattg
ggctatttactcaaactgcctaagcaatacgaaaatttcacctattacggtcgcggtaaa
caagataattatcccgaccgcaaatcgggggcttttgtaggtctctacagcggtaaggta
gccgatgaatttgtgcctttccctaaaccacaagatatggggcaacaccaagaaacccgc
tgggcagctcttaccaatgctcagggcgccggcgcagtgtttgtgggggctgaaccgcta
tcggtagcagctttaccttataaagctatcgatatgactttggcaggacacccctaccaa
ttaccagaatctgatggcgtgtacttgcaactgaacataggcaacacaggtttgggtgga
catagttgcggtcctcgtccgttgttgcgtgaccgtttgttagcaacccctcataatttc
ggtttcatcattcgtccagccaaagaagatttgcaaaccataaccaatgtaagtgcaagc
ggtgagcaacctctttctattactcgtagcaaagtaggaaaagtatctatcagtacagcc
aatgcccttgcaactatctattacagcatcaataatagcaaagcacagaaatacaccctt
cctttcgatttgcctaacggaggtattgtaaaagcatggtttgcaggtaatgaaactcag
aaatacacccttactttcggtaaagccgaaagcacggcaatggaagtaattttcgccagc
agtgaagaagcaggcgtaggtgacgccaaacatttagtagatggcgaccccaataccatt
tggcactccgcctattcagttactgtagccaaacacccacattgggtagatttcgatatg
ggaaaggtagttaatgtaaaaggctttagctttacccagcgcactgatagctggagcgga
aaggtaaaagattaccaaatacaactgagcaacgacggtaagaactggggcgaacccgtg
aaagtaggagcttttaaagatgtgagtagcgcccaacaagtgttgctcgacaaagttaca
aaagcacgctatgtgcgtttcaccgccctaagtgatttctatggcgaagatttcgccaca
ggtgccgaatttatggtgatattagaatag
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