Capnocytophaga ochracea: Coch_0197
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Entry
Coch_0197 CDS
T00961
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coc02000
]
Coch_0197
Transporters [BR:
coc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Coch_0197
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
C1_PlyCB
Motif
Other DBs
NCBI-ProteinID:
ACU91760
UniProt:
C7M560
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All DBs
Position
241800..243587
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AA seq
595 aa
AA seq
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MKNIIQKSFIALALMGTMSCGDDFFDKTPQDSLDPSKIDERLFIGLRNGIYRHLNDGYGG
IFEDGYADNGYSRNLWDSNGSSVQGNTLTSSQDYGYNGFYSGIRACNQVIEQVDNFQQIS
ANLREKYKTEARVMRAWIYGNLTLYFNNVPFVTTVANDYPDGLAQTPASEIRTWVLKELD
EAIAILPQTNDKGCFNKAMTYAIKARLAYYFGKYDQAEAAARYVIDNGGYRLHQVASLTP
DMIKDAEYFKKFVDFSAYGIDEDTFIKGLFNYQNIWKADNSPETIIAKEFIASEREGNWL
RVTALLTPNLVSKHAWATIVPIQELVDAYWTTDGKTKPTLSTMEQRILDYKALSDEVKTI
QEANKSTYSQAVNSIVNTLPNKAYMTQFKNRDSRLYASIIFPFSSVSKYRMNEYQQYIPD
IVNYGKSGYAFRKMSGADDVVPIWGDAYYTTGVDFPLIRLAEMMLIYAEAHTQNTGYDGT
VVTELNKLRTRVGMPEVPTGLSKNDALDFIRKERRIELAGEGLRFFDIRLYEDDTRNGGF
KGTEAASVVMRGQIKDVVGNPGTTKTWSARLMYMPIPQTALDKNKNAGMKQNPGY
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatcatacaaaaatcatttattgcgcttgccttaatgggtacaatgagttgt
ggcgatgactttttcgataaaaccccacaagattcattagatccttcaaagatagatgaa
cgtctttttatagggctccgaaatggtatctatcgccatttaaatgatggctatggcgga
attttcgaagacggatatgccgataatggctattcacgaaatctgtgggatagtaatggt
agttctgtacaaggaaatacacttacatcctctcaagattatggttataatggcttttac
tcaggcatacgtgcttgtaaccaagttattgaacaagtcgataactttcaacagatttca
gccaatttacgtgagaagtataaaactgaagctcgcgtaatgcgcgcgtggatttacgga
aaccttacgctttattttaataatgtacctttcgtaaccaccgttgccaatgattacccc
gatgggttagcccaaacaccagcctctgaaatcagaacgtgggtgcttaaagagttagac
gaagccattgctatattgcctcaaactaatgacaaaggttgttttaataaagcaatgacc
tatgccattaaagcgcgtttagcttattattttggtaaatacgatcaagccgaagcagca
gcccgctatgttattgataacggtggttatcgcttgcatcaagtagcatcccttactcct
gatatgataaaagatgctgaatactttaagaaattcgtagacttttctgcttatggcatt
gatgaagacacctttatcaaaggacttttcaattatcaaaatatttggaaagccgataat
agtcctgaaaccattattgctaaggagtttatcgcaagtgaacgtgaaggcaactggtta
agagtaacagccttattaactcctaatttagtgtctaaacacgcttgggctactattgtc
cctattcaagaattggtagatgcttactggacaaccgatggtaaaaccaagcctaccctt
tctactatggagcaacgtattctagattataaagcactttccgatgaagtaaaaacaatt
caagaagccaataaatctacttacagtcaggcagtaaatagtattgtgaacaccttgcct
aataaagcctatatgacacagttcaaaaatagagatagtcgtttgtatgcttctatcatc
tttccattctcctctgtaagtaaataccgaatgaacgaatatcagcaatacattcctgat
attgtaaactacggtaaaagtggttatgcctttaggaagatgagtggtgcagacgacgta
gtgcctatatggggtgacgcttattacactacaggagtagatttcccgctcattcgtttg
gctgaaatgatgcttatctatgccgaagcccatacccaaaatacaggttatgacggtaca
gtagtaactgaactcaacaagttgcgcactcgtgtgggtatgcccgaagtacctaccggt
ctttctaaaaatgatgctctcgactttattcgtaaagaacgtcgtatagagttggcaggt
gaaggtctgcgtttctttgatatccgcttgtatgaagacgatactcgcaacggaggattt
aaaggcactgaagctgcaagtgtggtaatgagaggacaaataaaagacgtagtaggtaac
cctggtactaccaaaacctggtctgcacgccttatgtatatgcctattccacaaacagct
ttagacaaaaacaaaaacgctggtatgaaacaaaacccaggatattaa
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