Capnocytophaga ochracea: Coch_0220
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Entry
Coch_0220 CDS
T00961
Name
(GenBank) two component transcriptional regulator, AraC family
Organism
coc
Capnocytophaga ochracea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Response_reg
HATPase_c
HTH_18
HTH_AraC
Peripla_BP_1
HisKA
ABC_sub_bind
HTH_24
HTH_8
HTH_7
HTH_11
HTH_IclR
HTH_20
TrmB
HPTransfase
Peripla_BP_3
Mga
HTH_AsnC-type
HTH_17
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ACU91783
UniProt:
C7M5H3
LinkDB
All DBs
Position
complement(286068..288872)
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AA seq
934 aa
AA seq
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MLIWSCLDKMTFRKYHILFLYFALFACLACQRERNPRYVIGVSQCSEDLWRQTMNEELKR
EVALYQANTELLIRSVKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGI
PVILVDRKIATESYTAYVGANNYQIGKEAGHYAIGILKGKGNIAEVRGTKGSTSDAERHK
GFVDALNNAPEVRIVAETWGNFLKADAKVQMQQLFQQHPNIDLVFAMNDPMAAGTHEAAM
QFNGKIPFIIGVDALQQEGISNIENNVQDASFIYPTGGEKVIDLAMKILHKQPFERENIL
NTAVVDKSNVRILQLQTEQIAQKQAKIEDINQQLSESLIQHTTQRTLFYISIIAIGLITI
FLAIAIRAYRTKSRANNLLEKQNEEIKRQATELQQQKERLEEISAQLEEATQAKLLFFTN
ISHEFKTPLSLILGPVQTLLAHNSLPKEEQDLLFLIKKNSNRLLHLISEVIEFRSYENGK
MQMYFTKGNLKRFLTELNSFFSDRIKQKKLNFQFLAEDTSFEMAFDKEKVEKIYFNLLSN
ALKFTPQGGSITVSLEKEDLPLTPSKGGVAVLRVFNSGSYIPKDKQSEVFEHFYKINPDS
EGSGIGLALVQALVASHNGTISVESTEGEGTTFLIRLPFTQEQVSVKAVYDSNYIETHLD
LLPSLPAPTEKLKLPTVSPTASEKPTVLIVEDNEDMRQFIRYILSDDYNLIEAENGEEGF
EVAKKHLPDVVISDVMMPKTDGFDLCQLIKTNVATNHIPVILLTAYALDEQKQVGFESGA
DAYIAKPFNIKLLKTRVRKLIENRKKIRESFSNFLLNETKQETLGKVEQQFITDFTHYVE
NSIANPEMNIDEIADALGLSRSNLYRKIKSLTDYSPNELIRTIRVKYAKQLLNSKAKSIS
EVAYEVGFSSPSYFAKCFKDFYNESPTEYLERIR
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttggagttgtttagataaaatgacttttaggaagtatcatatacttttttta
tatttcgctctctttgcttgccttgcttgccaaagggagcgaaacccccgttatgtgata
ggggtgtcgcagtgcagtgaagacctttggcgacaaacgatgaacgaggagctaaaacgc
gaagtagccctttaccaagccaatactgagctactgattcgcagtgtgaaagacgatact
cctaagcaaattgccgatatagagtggttcatagaacaaaaggtagatgtgctcgtggtt
tcgcctaacgagtcggaagcgtgtacaccagttattgaaaaggcttaccagcagggtatt
cccgtgattttggtagataggaaaatagctactgagagttatactgcctatgtgggagct
aataattaccaaataggtaaagaagcgggacactatgcgataggtattctcaaaggcaaa
ggcaatatagccgaagtgcgtggtaccaaaggctcaacctccgatgcggaacgccataaa
ggctttgtagatgcccttaataatgctcctgaggtgcgaatagtagccgagacctggggc
aacttcctcaaagcagatgccaaagtgcaaatgcaacaactttttcaacaacaccccaat
atcgaccttgtgtttgcgatgaacgacccaatggcagcgggtactcacgaagcagcgatg
caattcaacggtaaaataccctttatcataggggtagatgcgctacaacaagaaggaatt
agcaatatagagaacaacgtgcaagacgcatcgtttatctatcctacgggaggagaaaag
gttattgaccttgcaatgaaaatactccataaacaaccttttgagcgcgagaatatcctc
aataccgctgtggtggacaagagcaatgtgcgtattttacagttgcaaacagagcaaatt
gctcaaaaacaagctaagatagaggatatcaatcagcagctgagtgagagccttattcag
catactactcagcgtacactcttctacatttctattattgctattggtttgattactata
tttttggcaatagctatcagagcatatcgcaccaagagtcgtgcaaataatctgttagaa
aaacaaaatgaagaaatcaaacgtcaggctaccgaattgcaacaacagaaagaacgctta
gaggaaatctcggcgcaattagaagaggcgacccaagccaaattacttttctttaccaat
atttctcacgagttcaaaacaccgttgtcgcttattttaggacctgtgcagacgcttttg
gctcacaattcactccccaaagaagaacaagacttgttattcctcatcaaaaagaacagc
aaccgacttttgcatctcatttccgaagtaattgagttccgcagttatgagaatggcaag
atgcaaatgtacttcactaagggcaatctaaaacggtttcttactgaactcaattctttt
tttagtgaccgtatcaaacaaaagaaactcaactttcagtttcttgccgaagatacttct
tttgaaatggctttcgataaggaaaaagtagagaaaatctacttcaacctgctttctaat
gcactgaaatttacacctcaaggaggaagtatcaccgtgtcgttagaaaaagaagacctt
cccctaaccccctccaaaggaggagtagctgtgctacgtgtgttcaatagcggttcatat
atcccaaaagacaaacaaagtgaggtgtttgagcacttctacaaaataaatcccgatagc
gaaggttcgggtataggtttggctttggtacaagccttagtagcctcacacaacggtact
atcagcgtagagagtacagaaggggaggggacaaccttcctcattcgcctgccttttact
caagaacaagtatcggtaaaagcggtatacgacagcaattacatagaaacccatctcgac
ttattgccttcgttgcccgcacctaccgagaaactcaaactacctacggtttctccaacg
gcttcggagaaacctactgtactgattgtggaagataacgaggatatgcgtcagtttatt
cgatatatcctcagtgatgactataaccttatcgaagctgaaaacggtgaagaaggcttt
gaagtcgctaaaaagcaccttcccgatgtagtaatcagcgatgtgatgatgcccaagact
gatggcttcgatttatgtcagttgataaaaactaacgtggctactaatcatattcctgtg
attttgctcaccgcttatgcgttagacgaacagaagcaagtgggcttcgagagtggtgcc
gatgcctatattgcgaaacctttcaacataaaattactgaaaacacgagtgcgcaagctc
attgagaaccgcaagaagatacgtgagagttttagtaatttcctcttgaacgaaactaaa
caagagactttaggtaaggtagaacagcagtttatcaccgattttacgcattacgtagag
aactctatcgccaatcctgaaatgaatatagacgaaatagccgatgccttaggtttgtcg
cgctctaacctatatcgcaaaatcaaatccctcaccgactattcgcctaatgagcttatt
cgtaccatacgagtaaaatacgctaagcagttgctcaacagcaaagccaagagcatctcg
gaagtcgcttatgaagtaggattttcttctccttcctactttgcgaaatgctttaaagat
ttttacaacgagagtccgacagagtacttggaacggattaggtag
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