Capnocytophaga ochracea: Coch_0252
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Entry
Coch_0252 CDS
T00961
Name
(GenBank) UvrD/REP helicase
Organism
coc
Capnocytophaga ochracea
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ACU91815
UniProt:
C7M5K5
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Position
326800..329982
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AA seq
1060 aa
AA seq
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MNTPSANYTIYNASAGSGKTYSLVKAYLRIILGSKQPDLFRQLLAITFTNKAVFEMKNRI
IELLGVFSEDKMLTKPHAMFTELAKELNLPDEELRTRSAKALEHILHNYAAFNISTIDGF
NHQLIRHFSQDLHLNPFFEVQLDSKALLERAVDNLMNQAGNDPELTQLLIDFANEKIDDD
KSWDTTKELLGVAEMLTNENHYKQLQSLKDKEIPDFLILKNTLLKQRNNALKSIKTSAQD
FMQLMCEHGLDKGAFNGGHLYKFFDNLTADNPKEPSWGSGWQNNLLEGEPLYSGSAAKKY
DTALIDSLQEMIANLFLAIKKAFGALAFANNALRYVVPLALLNRIQKEIETIKEEENILP
IWEFNGVISSELSNQPAPFIYERIGEKFRHYFIDEFQDTSVLQWQNFIPLILNAVQSEVN
NKCGSVLLVGDAKQSIYRWRGGKAEQFMSLYNNEVNPFRIKGEVKDLNENFRSLEAIIDF
NNHFFKFAADLFQSETYKELYKNSTQEYPKNKKDQSLPEGYFNLSFIEVGEEEVPTEEDN
SNVVALSPRERSYCEAILEKIEHANRAGAADKDITILVRTNREGAAVASFLSEHQRNVIS
PDSLLLKNVASVQFLVTLLRLLYHPESEELKLQLLFDYLRFKETKDPHLFLSKYVEKPVN
TFLADFHFSIELFNQYSLYEGVALAVNCFDLARSSDAYLTHFMDIVFDFKNARKGGLADF
LEFWDDQQEKLSISSPEGLNAITVMTVHKSKGLSAPVIIYAFADSKLIDTHTEKLWFPVN
HEQFNGFDYLLVNSNKSLVNYDAQAEELMMQLHEQNLLNQLNVLYVAMTRPESFLYIITS
LSKSSAGTYGTLFREFLEENKQWNENVVEYTFGNPVFPEKKENAAAEESPIPFQKGWQYP
NYKIATGASLLWDTHQQEALERGNLIHELFSKITYATDLDTVLNDALQEGTLTAEQYELL
QPQMERLLNDSTLAPFFSEDYEYFMEREFIDANGNYFRPDRLAYNPNTREVYIIDYKTGQ
PNPQYHQQLSYYAQNLQAIGWQVKGKYLVYLDLGKVVKIL
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaccttcagcaaattatactatatacaacgcttcggcagggtctggaaagacc
tacagtctggtgaaagcttatctgagaattattctcggcagtaagcaacccgatttgttt
aggcagttactcgctattacctttaccaataaggcggtttttgaaatgaagaaccgcatc
atagagttattaggggtattcagtgaggacaaaatgctcactaaacctcacgctatgttt
actgaattagcaaaggaattgaatctccccgacgaagaactgagaacgcgttcggctaaa
gctttggagcatatactgcacaactacgcggcttttaatatcagtactatcgatgggttt
aaccaccaactgatacgccacttctcacaggatttgcatctcaatcctttctttgaagta
cagttggatagcaaggctttactagagcgagcggttgataatttgatgaatcaggcagga
aacgaccccgagcttacccaattgctcatcgatttcgccaatgaaaagatagatgacgac
aagagttgggatactactaaagaattattaggcgtagccgaaatgctcaccaatgagaac
cattacaagcaattacaatcgctgaaagacaaggaaatacccgattttctaattcttaaa
aataccttactcaaacaacgcaacaatgccctgaaaagcattaaaacttctgcccaagac
tttatgcaactgatgtgtgagcacggtttggataaaggtgcttttaatggaggacattta
tacaaattcttcgataacctcactgccgacaaccctaaggaaccttcgtggggcagtggt
tggcaaaacaatctattagaaggcgaacctctttattctggttcagcggctaagaagtac
gacactgccctgatagatagtttgcaagagatgattgccaacttgtttttggcaatcaaa
aaagcttttggagctcttgcctttgcgaacaacgcgctgagatatgttgtgcctttggct
ttgctcaaccgtatacaaaaagaaatagagaccattaaagaagaagaaaacatcttgcct
atatgggagttcaacggagtaatttcctcagagctcagcaaccagcctgcaccttttatc
tacgagcgtataggtgagaaattccgccactattttatcgatgagtttcaagacacctca
gtactgcaatggcagaactttataccgcttatcctcaatgcagtgcaaagtgaagtgaac
aataagtgcgggtcggtattacttgtaggcgatgccaaacaatcgatttatcgttggcga
ggaggaaaagcggaacagtttatgagtctgtataacaatgaagtaaaccctttccgcatc
aaaggagaagtaaaagacctcaatgaaaactttcgcagtttagaagccattatcgatttt
aacaaccatttttttaagtttgcagcagaccttttccaaagtgagacctacaaagaactt
tacaaaaactctacacaggaatatcccaaaaacaaaaaagaccaatccttacccgagggc
tatttcaatctttcctttatagaagttggagaagaagaagtgcctacagaagaagacaat
agcaatgttgtagcactttcaccgcgcgaacggagttattgtgaagcgattttagagaaa
atagaacacgctaaccgagcaggggcagccgataaggatattactatattggtgcgcacc
aaccgcgaaggagcagccgttgcctctttcctttcagaacaccaaagaaatgtaatttcc
cccgattcgctattgctgaaaaacgtggcatcagtacaatttctcgtcaccctattacgt
ctgctttatcaccctgaaagtgaagaactcaaactgcaattgctctttgattatcttcgt
tttaaagaaactaaagaccctcacctcttcctcagcaaatatgtagagaaacccgtaaat
actttccttgccgattttcacttctccatagagctgttcaaccaatattctttatacgaa
ggagtagctttggcggtgaattgttttgacctcgctcgctcttccgatgcttatctcact
cactttatggatattgtattcgattttaagaatgcgcgcaaaggaggcttagccgatttt
ctggagttttgggacgaccaacaagaaaaactgagtatcagttctcccgaagggttgaat
gctattactgtaatgacggttcacaagagcaaaggactttctgcccccgtgattatctac
gctttcgccgatagcaaactcatcgatacacatactgaaaaactttggtttcccgtaaat
cacgaacagtttaacggttttgactatctgctggtaaacagcaataaaagcttagtgaat
tacgacgcacaagccgaagagcttatgatgcaactacacgaacaaaacctcctcaaccag
ctaaatgtgttatatgtagcgatgacgcgtcccgaatctttcctctatataatcacctca
ctatccaaaagtagtgcaggaacgtatggcacgctctttagagagtttttagaagaaaac
aaacagtggaatgagaatgtagtggaatatacctttggaaaccctgtatttcctgagaag
aaagagaatgcagcagctgaagaatcacctattcctttccaaaaaggttggcagtatccg
aactacaagattgcgacaggggcttccctgctatgggacactcaccaacaagaagccttg
gagcgcggtaacctgattcatgagttattctcaaaaatcacttacgccaccgacctcgac
actgtactcaacgatgcgctacaagagggtactctcactgccgaacaatatgagctattg
caaccccaaatggagcgattactcaacgacagcactttagcacctttctttagtgaggac
tacgaatactttatggaacgtgagtttatagatgctaatggcaactatttccgtcccgac
cgacttgcctacaacccaaacactcgcgaagtctatatcatagattacaaaactggacaa
cccaaccctcagtaccaccaacagctatcgtactacgcccaaaacctgcaagctattggc
tggcaagtaaaaggaaaatatttagtgtatttggatttgggaaaagtggtaaagattctc
taa
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