Capnocytophaga ochracea: Coch_0305
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Entry
Coch_0305 CDS
T00961
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
coc01011
]
Coch_0305
Enzymes [BR:
coc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Coch_0305
Peptidoglycan biosynthesis and degradation proteins [BR:
coc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Coch_0305
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
Rep3_C
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
ACU91868
UniProt:
C7M5Z1
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All DBs
Position
384453..385775
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AA seq
440 aa
AA seq
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MTLKKYTLGTLFCFLIGSLSVEAQSSFSKDTINQTIANNKREALRKLNDNPKARKYDEKW
LKELSNSDLFEQMSEDIATTPTDVTYDELPTEVLKKRLEKLNQKTPFNVEYNPILEQVIK
SFLKNRRSSLERLMTLSDYYFPMFEQEMSNQKIPLEMKYLAIIESALNPKARSRAGATGL
WQFMYSTGKGYGLEVNNYVDERSDPIRSTKAAAKYLNELYKIFGDWDLTLAAYNSGPGNV
TKAIRRSNGKTNYWNLRPYLPRETAGYVPAFLATLYIFEYAKEHGFKPQKRANHVFETDT
IRVKQAISFKDISDITGMDVKDIQFFNPSYQLDVVPYVEGRNYAVRLPISEIGKFVANEE
AIYAYLNEEKANREQPLPQVVKGDQYAGGRSSKKTVYTVKKGDNLGKIATRHGVTVSNLK
RWNRIKGSNIRVGQRLSIYR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacacttaaaaaatatacattgggaactcttttttgttttttaatcggtagtttatcc
gttgaagcacagagctcgttctccaaagataccatcaatcaaactattgctaacaacaaa
cgcgaagctcttcgcaaactaaacgacaaccctaaggcaagaaaatacgatgaaaaatgg
ctaaaagaactctctaattccgatttattcgagcaaatgagtgaagatatcgctactacc
cccaccgatgtaacctacgacgaacttcccactgaagtcctcaaaaaacgattagagaaa
cttaaccagaaaactcctttcaatgtagaatataatcctatcttggaacaggtaatcaag
tcgtttctcaaaaatcgccgttcttctttagagcgcctaatgacccttagtgattattat
ttcccgatgtttgaacaagagatgagtaatcaaaagattcctttagagatgaagtattta
gccattatcgagtcggctctaaaccctaaagctcgttcgcgtgcaggggctacaggctta
tggcagtttatgtacagtacaggtaaaggttatggcttagaagtaaataattatgttgat
gagcgtagcgaccccattcgctctaccaaagcagctgcaaaatacctaaatgaactctat
aaaatatttggtgactgggatttaacactcgccgcttacaattcaggacccggtaatgta
accaaagccattcgccgttccaatggcaagactaactattggaatttgcgcccttatctt
cccagagaaaccgctggatatgtaccggctttcttggcaactctctatatttttgaatat
gccaaagaacacggcttcaagcctcaaaagcgcgctaatcacgtttttgaaaccgatact
atccgcgtaaagcaagctatatcttttaaagacatttccgatattacaggtatggacgta
aaagatattcagttttttaacccttcctatcaattagatgttgtcccttatgttgaaggt
cgtaactacgccgtgcgcttacctatttccgagataggtaagtttgtagccaacgaagag
gctatctatgcttatctaaatgaagaaaaagcaaaccgtgagcaacctctccctcaagtg
gtaaaaggcgaccaatatgcaggaggcagatcttctaagaaaacagtctacacggtaaag
aaaggagataatttaggaaagattgctacacggcacggagtaacagtttctaatctcaaa
cgctggaaccgtatcaagggcagtaatattcgtgtaggacaacggctctctatctatagg
taa
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