Capnocytophaga ochracea: Coch_0317
Help
Entry
Coch_0317 CDS
T00961
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Coch_0317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coc03019
]
Coch_0317
03110 Chaperones and folding catalysts [BR:
coc03110
]
Coch_0317
03029 Mitochondrial biogenesis [BR:
coc03029
]
Coch_0317
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
coc04147
]
Coch_0317
Enzymes [BR:
coc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Coch_0317
Messenger RNA biogenesis [BR:
coc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Coch_0317
Chaperones and folding catalysts [BR:
coc03110
]
Heat shock proteins
HSP60 / Chaperonin
Coch_0317
Mitochondrial biogenesis [BR:
coc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Coch_0317
Exosome [BR:
coc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Coch_0317
Exosomal proteins of other body fluids (saliva and urine)
Coch_0317
Exosomal proteins of breast cancer cells
Coch_0317
Exosomal proteins of colorectal cancer cells
Coch_0317
Exosomal proteins of bladder cancer cells
Coch_0317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
SesA
Motif
Other DBs
NCBI-ProteinID:
ACU91880
UniProt:
C7M603
LinkDB
All DBs
Position
397148..398782
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDIKFDIDAREGLKRGVDALANAVKVTLGPRGRNVIISKSFGSPQVTKDGVTVAKEIE
LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVASGANPMDLKRGID
KAVAKIVEHLAKQAKEVGSSSEKIKQVASISANNDDTIGELIAQAFEKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTDSEKMVAELDHPYILLYDKKISTMKDLLPVLEPV
AQSGKPLLIIAEDIDGEALATLVVNKLRGTLRIAAVKAPGFGDRRKAMLEDIAILTGGTV
IAEERGFTLENATIDMLGTAERVSIDKDNTTIVNGAGKSDNIKARVAQIKAQIENTSSDY
DREKLQERLAKLSGGVAVLYIGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGIALI
RAKNVLGKLKPLNADEETGIKIILKALEAPLRTIVENAGVEGSVIVARVLEASRDAYGYN
AKTGTYTDMFKAGIIDPKKVTRVALENAASVAGMILTTECALVDIKDDKAAAMPPMGGGM
PGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaatttgatatagacgcccgcgaaggtttaaaacgtggcgttgat
gcattagcaaatgcagtaaaagtaacattaggccctcgtggtcgtaatgtaattattagc
aaatcatttggttcaccacaagtaaccaaagacggggtaaccgttgctaaggaaatagaa
ctagaagacgctctcgaaaatatgggcgctcaaatggtgaaagaagtagcttctaaaacc
aatgacctcgcaggcgatggtaccactaccgctactgtattagcacaagctatcgtaaaa
gaaggtcttaaaaacgtagcttctggtgctaacccaatggatttaaaacgtggtattgat
aaagccgtagcaaaaatcgtagaacacttggctaaacaagctaaagaagtaggctcttct
tctgaaaaaatcaaacaagtagcctctatctctgctaacaacgacgatactattggcgaa
cttatcgctcaagcattcgagaaagtaggtaaagaaggggttatcaccgtagaagaagca
aaaggtacagatacttacgtagatgtagtagaaggtatgcagttcgaccgcggttacctt
tctccttacttcgtaaccgattctgaaaagatggttgcagaactcgaccacccttatatc
ttgttgtacgacaagaaaatctctactatgaaggacttgcttcctgtattagagcctgta
gctcaatctggcaaacctcttttgattatcgctgaagatatcgatggtgaagcattagct
accttagtagtaaacaaattgcgcggtacccttcgcatcgctgctgtaaaagctcctggt
tttggtgaccgtcgtaaagcaatgctcgaagatatcgctatccttactggtggtactgta
attgccgaagaaagaggctttacccttgaaaacgctactatcgatatgcttggtactgcc
gaaagagtaagtatcgacaaagataacaccactattgtaaatggtgctggaaaatctgat
aatatcaaagcgcgtgtagcacaaatcaaagcacaaatcgaaaacacctcttctgattat
gaccgtgaaaaactacaagagcgtttagctaaactctctggtggggtagcagtgctttac
ataggtgctgcttcggaagtggaaatgaaagagaaaaaagaccgtgtagatgatgccctt
cacgctactcgtgcagctgttgaagaaggtatcgtagcaggaggtggtatagcgcttatt
cgtgctaaaaatgttttaggaaaactaaaacctctcaatgccgacgaagaaacaggtatt
aaaattatcctcaaagcattggaagctcctttgcgcactatcgtagaaaacgcaggtgtt
gaaggttctgtaatcgtagctcgtgtactcgaggcttcaagagatgcttacggatacaat
gccaaaacaggtacttataccgatatgtttaaagcaggtatcatcgaccctaaaaaggta
acccgtgtagcccttgaaaatgctgcctcagtagctggtatgattctcactaccgaatgt
gctttggtagacatcaaagacgataaagcagctgcaatgcctccaatgggtggtggaatg
ccaggaatgatgtaa
DBGET
integrated database retrieval system
