Capnocytophaga ochracea: Coch_0355
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Entry
Coch_0355 CDS
T00961
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc00730
Thiamine metabolism
coc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Coch_0355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
coc03009
]
Coch_0355
Enzymes [BR:
coc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
Coch_0355
Ribosome biogenesis [BR:
coc03009
]
Prokaryotic type
GTPases
Coch_0355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
RsgA_N
GTP_EFTU
MMR_HSR1
ABC_tran
MMR_HSR1_Xtn
AAA_29
AAA_16
ATP-synt_ab
Septin
nSTAND3
AAA_23
nSTAND1
AIG1
cobW
eIF-1a
AAA_22
Dynamin_N
TsaE
Viral_helicase1
Poly_A_pol_cat
AAA
RNA_helicase
AAA_30
NACHT
AAA_19
SLFN-g3_helicase
SMC_N
AAA_28
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACU91918
UniProt:
C7M641
LinkDB
All DBs
Position
complement(442903..443841)
Genome browser
AA seq
312 aa
AA seq
DB search
MEGLVYKSTGSWYTVKDVATEQFYECRIKGKFRIKGIKNTNPIAVGDRVLFRLEESNRGV
ITEIKERDNYIIRKSVNLSKQTHIIASNINLAFLVVTLNNPPTSTTFIDRFLVTAEAYGI
KTVLLFNKVDTYTEDELTEVKFLASIYRKAGYKCIGISATTGKNIDKVKTIMEGKTCVVS
GHSGAGKSTLINAIAPNLHLKTAEISQQHQQGQHTTTFAEMFDLPFGARIIDTPGIKGFG
MVEIEKEELTDYFPEFFALKHQCKFNNCLHTDEPQCAVKAALDRDEIAWSRYKSYLQILK
GEESVYREGEGE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaagggttagtctataaatctacaggaagctggtacacagtgaaggacgtcgctacg
gagcagttctacgagtgtcgcatcaaaggcaaattccgaataaaaggcattaagaacaca
aatcccatagccgtgggcgaccgcgtgctctttcgtttggaagagagcaacagaggcgtc
attaccgagataaaagaacgcgataactacatcattcgtaaatcagtaaacctctctaag
caaactcatatcatcgcttccaatatcaacctcgctttcttggtagtaaccctcaacaat
ccgcctacctctactactttcatcgaccgttttttggtaactgccgaagcctatggtatc
aaaaccgtattgcttttcaacaaagtagatacttatacagaagacgagctcaccgaagtg
aaattcctcgcttcaatataccgcaaggcaggttataaatgtataggtatttcggctact
acgggcaaaaatatcgataaggtaaaaaccattatggaaggaaaaacctgcgtggtatca
gggcattctggtgcgggcaagtctaccctcatcaatgccatagctcccaatttacatctc
aaaactgccgaaatctctcagcaacatcagcaaggtcagcacactaccacttttgccgag
atgttcgatttgccttttggggcacgcattatcgatactccaggtatcaaaggctttggt
atggtagaaatcgaaaaagaagaactcaccgactattttcccgagtttttcgctctcaaa
caccaatgtaagttcaataactgtctccataccgatgaaccccaatgcgctgtaaaagca
gccttagaccgcgatgaaatcgcttggtcgcgctacaaaagctatctccaaatcctaaaa
ggcgaagaaagcgtataccgagaaggcgaaggagagtaa
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