Capnocytophaga ochracea: Coch_0378
Help
Entry
Coch_0378 CDS
T00961
Name
(GenBank) ABC transporter related
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
coc03012
]
Coch_0378
Translation factors [BR:
coc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Coch_0378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
ABC_tran_CTD
AAA_29
AAA_22
nSTAND3
NACHT
AAA_16
TsaE
Dynamin_N
NPHP3_N
AAA_33
MMR_HSR1
RsgA_GTPase
SMC_N
ATP-synt_ab
Zeta_toxin
AAA_15
AAA
PduV-EutP
AAA_23
MeaB
AAA_7
NTPase_1
AAA_18
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ACU91941
UniProt:
C7M664
LinkDB
All DBs
Position
complement(480721..482613)
Genome browser
AA seq
630 aa
AA seq
DB search
MLNVHNLSVSFQGEYLFEDVAFMLNAGDRVGLIGKNGAGKSTMLKLLSRELKPDTGGIAT
DKDVRIGFLKQDIDFVKGRTILEEAYQAFTEIKALERQLDDIHHQIETRTDYESEAYHDL
LDKLSDYTHRFDLIGGYQYQGETEKVLLGLGFERTDFDKLTDSFSGGWRMRIELAKLLLQ
NNDILLLDEPTNHLDIESIIWLEQFLSTYSGAVVIVSHDRMFLDNVTNRTIEISIGKIYD
YPKPYTQFLELRKEMRELQLASQKNQEKKIQHTEKLIEKFRAKATKASMAQSLIKKLDKI
ERIEVDEEDNAVMNVRFPVSVTPGKVVLEIDDVSKSYGEKEVLSHVSLLIERGSKVAFVG
QNGQGKTTLAKMIVGEIPYEGTIRLGHNVQLAYFAQNQADYLDGELTVLDTMFNAANDSN
RTKIRDILGAFLFRGDEVDKKVKVLSGGERNRLALAKMLLSDFNVMVMDEPTNHLDIKSK
NVLKQALQQFEGTLIIVSHDRDFLQGLTDKVYEFKNKHLKEYLGDIDFFLEQRAAVNFRE
IEQQSKSTPVQVEKEPQKEEKLSFEEQKQQKAIQNKLNKIEKNITALEEALKAMNEQMGQ
GVQNDAFYKEYEQKKQQLEDLMTEWELLMS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacgttcacaacctatctgtttcttttcagggcgagtacctctttgaggacgtt
gcttttatgctgaatgcgggcgaccgtgtggggcttattggcaagaacggagcggggaaa
tcgacgatgctcaaattgctttcacgcgaacttaaacccgataccggaggcattgctacc
gataaagatgtacgcatcggatttctgaaacaggatattgattttgtgaaaggacgtacc
attttggaagaagcctatcaggcatttactgagattaaggctttggaacgtcagttggac
gatattcatcaccagatagaaacccgcactgattacgagagcgaggcgtaccacgatttg
cttgataaactcagcgactatacgcatcgttttgaccttatagggggataccaataccaa
ggagaaaccgagaaagtgctattggggttgggctttgagcggactgatttcgacaagctc
accgacagcttttcgggcgggtggcgtatgcgtatagagttggcaaaactgctgttgcag
aacaacgatatattgctattggacgagcctacgaaccacttggatatagagtcgattatt
tggttagaacagttcctctctacttatagcggggcggtggtaattgtatcgcacgacaga
atgtttttagacaatgtgaccaatcggacgattgagatttcgataggcaaaatatacgat
tacccgaagccttacactcagtttttggaactgagaaaagagatgcgcgaactgcaactc
gcctcacaaaagaaccaagaaaagaagatacaacacactgaaaagctcatcgaaaaattc
cgcgccaaagctaccaaagcctcaatggcacagtcgcttatcaagaagttggacaagata
gagcgcatagaggtagacgaggaagacaatgcggtgatgaacgtgcgtttccccgtatcg
gtaacgccagggaaggtggtgctggaaatagacgatgtatcgaaaagttatggtgaaaaa
gaggtgctcagccacgtgagtttgcttatagaacgaggcagcaaagtagcttttgtggga
caaaacggacaggggaaaacgaccctcgccaagatgatagtgggcgaaataccctatgaa
ggaactatcaggctggggcacaatgtacagttggcttactttgctcagaaccaagccgac
tacttagatggagaactcaccgtgcttgatacgatgtttaatgcagctaacgacagcaat
cgcactaaaatacgcgatatacttggggcttttctcttccgtggcgatgaggtagacaag
aaagtgaaagtactttcgggaggggagcgcaaccgtttggcattggcaaagatgctcctt
tcggactttaacgtaatggtgatggacgagcctacgaaccacttggatatcaaatcgaag
aacgtactcaaacaagccttacagcaatttgaagggacgctcattattgtgtcgcacgac
cgcgatttcttgcaagggctcaccgataaggtatacgagtttaagaacaaacatctgaaa
gaatatcttggggacatcgatttcttcctcgaacaacgtgctgccgttaattttagagag
atagaacagcagagcaaaagcactcctgtacaggtagaaaaagaaccgcagaaagaagaa
aaactctcgtttgaggaacagaaacagcagaaagccattcagaataagctcaacaagata
gagaagaacattaccgctcttgaagaagcgcttaaagcgatgaatgagcagatgggacaa
ggcgtacagaacgatgctttttacaaggaatacgaacagaaaaaacagcagttggaagat
ttaatgaccgagtgggaattattaatgagttaa
DBGET
integrated database retrieval system
