Capnocytophaga ochracea: Coch_0385
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Entry
Coch_0385 CDS
T00961
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K02005
HlyD family secretion protein
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Coch_0385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_YknX
Beta-barrel_RND_2
BSH_RND
BSH_CzcB
RND-MFP_C
HH_MFP_RND
BSH_CusB
Beta-barrel_AprE
CzcB_C
HH_CzcB
LcnD_C
Beta-barrel_RND
TP096X_C
YknX_C
Biotin_lipoyl
Beta-barrel_ALG44
HH_EMRA
CSD2
BSH_YknX
Nrap_D5
Motif
Other DBs
NCBI-ProteinID:
ACU91948
UniProt:
C7M671
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Position
492505..493734
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AA seq
409 aa
AA seq
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MKKHIKKIIIIVLLAVVAFGVYHFFMKEKPSFIVLQTDKVTEGDVTTEVTATGSVQPVDE
VEVGTQVSGLVSKIYVDYNSQVKKGQLLAELDKTNLQEMVVNATANYQSALNELNYYRQN
YERQQKMYNAQVISKSDYEQALYQFNNAKTNVAQRLTTLNQAKTNLGYANIYSPINGIIL
SKEVEEGQTVAASMSAPTLFKIAKDIKRMQVEADVDEADIGQVKVGQRVSFTVDAYPQEE
FSGKVTQVRLSPTTTSNVVTYTVIVEAENPDEKLKPGLTATIAIYTNELKGVTIVPAKAM
NFTPDIDLLMQYYAQKGITAEVPKVQHGKGKNKYVWVVNTDGSLAQKAITIGSNDGINVQ
VVSGLSVGEKVATNLQSNRPQVAEGEKNNDDSSSPFMPKRPRRDNSKAK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacacattaagaaaatcatcattatcgtactattagccgtagtggcttttggg
gtgtatcacttctttatgaaggaaaaaccttcttttatcgtcctgcaaaccgataaggta
accgaaggtgacgttactaccgaagtaactgctactggtagcgtacagccagtggacgag
gtggaagtaggtacccaagtatcgggattggtaagcaagatttacgtagattacaacagc
caagtgaagaaaggacagctactggcggaactcgacaagacgaacctacaagaaatggtt
gtaaatgctactgccaactaccaatcggcactcaacgaactgaattactaccgtcagaat
tacgaacgacaacagaaaatgtacaatgcccaagtgattagcaaatcggactacgagcag
gcattgtatcagttcaacaacgcgaaaacaaatgtagcacaacgtcttacgaccctcaat
caagcaaaaaccaatttggggtatgccaatatctattcgcctatcaatgggattatcctc
agcaaagaggtagaagaagggcaaacggtagccgcctcgatgagtgcgcctacactcttc
aaaatagccaaagacatcaagcgtatgcaggtggaagccgatgtagacgaagccgatata
ggacaagtgaaagtagggcaacgtgtgagctttaccgtagatgcttacccccaagaagag
ttttcggggaaggtaacccaagtgcgtctatcacctactacgacttcgaacgtggtgacc
tatacggtgatagtagaggctgaaaaccccgatgagaagctcaaacctgggcttaccgcg
accatcgctatctataccaatgagctaaaaggcgtaaccatagtgcctgcgaaagcgatg
aatttcaccccagacatcgacctactgatgcaatactacgctcagaaaggcattacagct
gaagtccctaaagtacagcacggcaagggtaaaaacaaatacgtatgggtagtgaacact
gacggtagtcttgcccaaaaagcgataaccataggtagtaatgatggtatcaacgtgcaa
gtggtaagcggactcagtgttggagaaaaagtagctaccaacctgcaaagcaatcgccct
caagtagcagaaggtgagaaaaataacgacgatagcagtagtccgtttatgcctaaacgc
ccccgtcgtgataactcaaaagccaaataa
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