Capnocytophaga ochracea: Coch_0562
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Entry
Coch_0562 CDS
T00961
Name
(GenBank) hypothetical protein
KO
K03111
single-strand DNA-binding protein
Organism
coc
Capnocytophaga ochracea
Pathway
coc03030
DNA replication
coc03430
Mismatch repair
coc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Coch_0562
03430 Mismatch repair
Coch_0562
03440 Homologous recombination
Coch_0562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coc03032
]
Coch_0562
03400 DNA repair and recombination proteins [BR:
coc03400
]
Coch_0562
03029 Mitochondrial biogenesis [BR:
coc03029
]
Coch_0562
DNA replication proteins [BR:
coc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Coch_0562
DNA repair and recombination proteins [BR:
coc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Coch_0562
TLS (translesion DNA synthesis) factors
Other SOS response factors
Coch_0562
Mitochondrial biogenesis [BR:
coc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Coch_0562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3127
SSB
TFIIA
Motif
Other DBs
NCBI-ProteinID:
ACU92120
UniProt:
C7M7G3
LinkDB
All DBs
Position
complement(703705..704226)
Genome browser
AA seq
173 aa
AA seq
DB search
MEIQGRIIKISPTQTVGQNGFQRRDVVISTEEQYPQYIPFDFVQEKCVLLDNFQVGQLVR
ISFNIRGREWVNPQGETKYIVNLQGWRIENAEVAQGAYPPPQGQYPPQGQPAYPPQGYAQ
PQYQQAPPQYQQAPPQYQQTPAQYPPQAPQQAFSAPDPAQGASAPTEEDDLPF
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcaaggacgaattataaagattagccctacacaaaccgtaggacaaaacggc
tttcaacgccgtgatgtggtgatttctactgaggaacaatacccccagtatatccctttt
gactttgtacaagaaaaatgtgtacttctcgacaactttcaggtagggcaattggtacgc
atcagtttcaatattcgcggtcgtgaatgggtaaacccacaaggagaaactaaatatatt
gtgaacttacaaggatggcgtattgaaaatgctgaggtggcacaaggagcctatccccct
ccgcaagggcaatatccaccacaggggcaacctgcttatccgccacaaggatatgcacaa
ccacaatatcagcaagcgcctccgcaatatcagcaagccccaccacaataccaacaaacg
cccgctcagtatccgccacaagcccctcagcaggcttttagtgcaccagaccccgcacag
ggagcttctgcccctactgaggaagacgatttgccattctaa
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