KEGG   Capnocytophaga ochracea: Coch_0568
Entry
Coch_0568         CDS       T00961                                 
Name
(GenBank) CRISPR-associated protein, Csn1 family
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
coc  Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:coc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:coc02048]
    Coch_0568
Prokaryotic defense system [BR:coc02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    Coch_0568
SSDB
Motif
Pfam: RuvC_III HNH_4
Other DBs
NCBI-ProteinID: ACU92126
UniProt: C7M7G9
LinkDB
Position
complement(709756..714036)
AA seq 1426 aa
MKNILGLDLGTTSIGFAHIVEDENKEKSEIKELGVRIVSLTTDEQSDFEKGKSITTNANR
TLKHGARLNLDRYQQRRKYLIDLLQKANLITPSSILAENGKNTTHSTWQLRAKAVTERIE
KEEFARILLAINKKRGYKSSRKAKTEDEGQAIDGMAIAKRLYDENLTPGQLSLQLLQQNK
KLLPDFYRSDLQKEFDLVWNFQKQFYPDILTDIFYKELQGKGKDATSKAFSKRYHFDTTE
NKGSKESVRLQAYQWRAEAISKQLSKEEVAYVLTEINNNLNNASGYLGAISDRSKELYFN
RQTVGQYLYAKLQENRHNSLKNKVFYRQDYLDEFERIWETQASFHKELTDELKKQIRDVV
IFYQRKPKSQKGLISFCEFESKEIEIEKDGKTITKNIGARVVPKSSPLFQEFKIWQILNN
VICKRKGIRKKKISAKTTQLDLLNESSQTIFSLDMECKQLLFDELNLKGDLKSDKVLKLL
GYSPQEWEINYNQLEGNRTQKALYEAYLKIVEMEAHDVKDILQIKSAKDDWSLDESPLSA
SEIREKVKAIFQTLGICTKILYFDPLLPVKEFEEQDSYQLWHLLYSYESDDSTSGNETLY
RILEKKYAFKREHARILANVALQDDYGSLSTKAIRKIYPNIKENQYSTACEKAGYKHSKL
SLTTEELEARELKNIIPLLKKNALRNPVVEKILNQMINVVNALIEKNSERDAEGKITKYF
HFDEIRIELARELKKNAQKRYEMTQNINKAKLEHQKISEILQKEFGIKNPTKSDIIRYRL
YQELEHNGYKELYTNAPIARDMLFSKNIEIEHIVPKARVFDDSFSNKTLTFHRINSDKGE
YTAFDYITSLNSEEELNQYLTRVENAYKTKSISPTKYKNLLKKASEIGDDFINRDLRDTQ
YIAKKAKEILFQVTKNVLSTSGSITDRLREDWGLVDVMKELNMPKYQSLGLTEVEERKDG
NKVTVIKNWTKRNDHRHHAMDALTVAFTKPSYIQYLNHLNARKDENNKNYSVILAIEEKE
TIKVPTNNGKNKRVFIEPIPNFRQVAKKHLEEIFISHKAKNKVVTKNTNKPAGTDKQQIT
LTPRGQLHKETIYGKYQYYINKEEKIGVKFDERTIAKVSNPVYREALLKRLQANDNDPKK
AFAGKNALSKNPIYLDESKTKTLPEKVNLTYLEEDFSIRKDISPDNFKDLKSIEKVIDQG
VKRILIKRLQAYDNDPKKAFVDLEKNPIWLNKEKGIAIKRVTISGVNNAQPLHIGKDHLG
KTTLNKEGKEIPVDYVSTGNNHHVAIYRDKEGNLQEQIVSFFDAVVRAQQGIPIIDKTYK
QAEGWQFLFTMKQNEMFVFPNATTGFNPAEIDLLDPKNKKLISPNLFRVQKIATKDYFFR
HHLETNVETDNILKNVTWKREGLSGLKDIVKVRINHLGDIVSIGEY
NT seq 4281 nt   +upstreamnt  +downstreamnt
atgaaaaatatacttggattagatttgggcaccacttcaataggttttgcccatattgta
gaagatgaaaacaaagaaaaatcagagattaaggaattaggagtgcgtattgtgtcttta
accacagatgaacaatccgactttgaaaaaggaaaatcaataactactaatgccaataga
acccttaagcacggagcaagactaaatcttgatcgctatcaacaaaggcgaaaatatctc
atagatttattgcagaaagcaaacctaattactccctcctctatcttagctgaaaatggc
aaaaataccacacattctacttggcaattgagagctaaagctgttaccgaacgtatcgag
aaagaagagtttgctaggatactactggctattaataaaaaacgaggttataaaagcagt
agaaaagcaaaaactgaagacgaaggacaagcaatagatggaatggctatagcaaagcgc
ctctatgatgaaaacttaactccaggacagttatcgctacaattacttcaacaaaacaaa
aaactcctcccagacttttatcgttcagatttacaaaaagaatttgacctcgtttggaat
tttcaaaaacagttttaccctgatatcctaacagatattttttataaagaattgcaaggg
aaaggtaaggatgctacttcaaaagctttttctaaaagatatcattttgacacaactgaa
aacaaaggttctaaagaatctgttcgtttgcaagcctatcagtggcgtgcggaggctata
tctaaacaactttcaaaagaagaagtagcttatgtcttaaccgaaatcaacaacaatttg
aacaatgcaagtggctatttaggcgctatttccgatagaagtaaagaactctatttcaat
cgtcaaacagtagggcaatacttgtatgcaaagcttcaggaaaataggcataatagcctt
aaaaataaagtgttttaccgtcaggattacttagatgagtttgaacgcatttgggaaact
caagcttcatttcacaaagaattgactgatgaacttaaaaagcaaatccgtgatgtggta
attttctatcaacgtaaacctaaatctcaaaaaggattgatatcattttgtgagtttgag
agcaaagaaattgagatagaaaaagacggaaaaactataactaaaaacattggagctcgt
gttgtccctaaatcctctcctttgtttcaagaatttaagatttggcaaatactcaataat
gttatctgcaaaagaaaaggtattaggaaaaagaaaatctctgctaagactactcagtta
gatttgctcaatgaatcttctcaaacgatttttagtttggatatggaatgcaaacaactc
ctttttgacgaactgaatctaaaaggagacctaaaatcggataaagtactgaaattatta
ggctattctcctcaagaatgggaaatcaactacaatcaattagaaggaaatcgcactcaa
aaagcactctatgaagcctatttgaagattgtcgaaatggaagctcacgatgtgaaagat
attttacagataaaatctgcaaaagacgattggtctttagacgaatctcctctttcagct
tccgaaatcagagaaaaggtaaaagctatctttcaaacattaggaatatgtactaaaatc
ctttattttgaccctcttttgcctgtaaaagagtttgaagagcaggattcctatcagcta
tggcatttgctttattcctatgaaagtgatgattctacctctggtaacgaaactctttac
cgaatcttagaaaagaaatacgcttttaagagagaacacgctagaatactcgccaatgta
gccttgcaagatgattacggtagcctatctactaaagctatccgcaagatataccctaat
ataaaagaaaatcagtatagcacagcttgtgaaaaggcaggttataagcactctaaacta
tctctaaccacagaagaattagaggctcgtgaactgaaaaatatcattccactacttaaa
aagaacgctttgagaaatcctgtagttgagaaaattcttaatcagatgatcaatgtagtg
aacgctttgattgagaaaaacagtgaacgagatgctgaagggaaaattacaaaatatttt
catttcgatgaaattcgcattgaattagctcgtgagttaaagaaaaatgcgcaaaagagg
tatgaaatgacccaaaatatcaacaaagctaaattagaacatcaaaagattagcgaaata
cttcagaaagaatttggcatcaagaatcctacgaaatctgatattattcgttatcgcttg
tatcaagaattggaacacaatggctataaagaactatatactaatgcccctatagctcga
gatatgttgtttagtaaaaatattgagatagaacacattgttcctaaggcacgagtgttc
gacgatagtttttctaataaaacattgactttccatagaataaatagtgacaaaggagaa
tatactgcttttgattatattacttctttaaatagtgaagaagaactcaatcaatatctc
accagagtagaaaatgcctataaaacaaaaagcatttctcctactaaatacaagaattta
ctcaaaaaagcctctgaaataggtgatgactttatcaatagagacctgagagatactcag
tacatagctaaaaaagctaaagaaatactcttccaagtaactaaaaatgtgctgtctacc
tcaggaagtatcaccgatagattgcgcgaagactggggcttggtagatgtgatgaaagag
ttaaatatgcctaaatatcagtcgttaggacttactgaagtagaagaacgcaaagatggt
aacaaagtaactgtgattaagaactggacaaagcgtaacgaccaccgtcaccacgcaatg
gatgcccttacggtagctttcaccaaaccttcttacatacagtacctcaatcatctcaac
gctcgaaaagacgaaaacaacaaaaattattcggttattttagctatcgaggaaaaagaa
acaattaaagttccaactaataatggtaagaataagagagtttttatagagcctatacct
aactttagacaagtagcaaaaaaacacctcgaagaaatattcatttcgcacaaagcaaag
aataaagtagttaccaaaaacacaaataaacctgctggcactgataaacaacaaattaca
ctcacgccacgaggtcagctgcacaaagaaactatatatggcaaataccaatattatatc
aataaagaagaaaaaataggtgtaaagtttgatgaaagaactatcgcaaaagtctctaat
cctgtttatcgcgaagcattgctaaaaagattgcaagctaatgacaacgaccctaaaaaa
gcctttgcagggaagaacgcactatctaaaaaccctatttatttagatgaatcaaaaact
aaaactttgccagaaaaagtaaatctcacctacttggaagaagatttttctattcggaaa
gatatttctccagacaatttcaaagatttgaaatctattgaaaaagtaattgatcaagga
gtaaaacgtattcttatcaagcgactccaagcctacgataatgatcctaagaaagccttt
gtagacttagaaaagaaccctatttggctcaataaagaaaaaggaattgcgattaaacgc
gttactataagtggcgtgaacaacgctcaacctttgcacataggaaaagaccatttagga
aaaactactttaaataaagaaggaaaagaaattcctgtagattatgtaagtactggcaat
aaccaccacgtggctatttatcgggataaagaaggtaatttgcaggaacaaatagtttca
ttctttgacgctgtcgtacgagctcagcaagggattcctattattgataaaacctacaaa
caagcagaaggttggcaatttctgttcactatgaaacagaatgaaatgttcgtatttccc
aatgcaacaacaggttttaatcctgctgaaatagacttgttagatcctaaaaataaaaaa
ttgataagccccaatttgtttagagtacaaaaaatagctactaaagattatttttttaga
catcacttagaaactaatgtagagacagataatattttaaaaaatgtaacttggaagaga
gaaggcttgtcagggttaaaagatatcgtaaaagtccgtattaatcacttaggcgatatt
gtaagcataggcgaatattaa

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