Capnocytophaga ochracea: Coch_0931
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Entry
Coch_0931 CDS
T00961
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coc02000
]
Coch_0931
Transporters [BR:
coc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Coch_0931
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_19
TPR_8
TPR_1
TPR_10
TPR_12
Motif
Other DBs
NCBI-ProteinID:
ACU92486
UniProt:
C7M9E0
LinkDB
All DBs
Position
complement(1082842..1084326)
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AA seq
494 aa
AA seq
DB search
MKKILYITLLAFPLFTACSKFLDKTPYEDSSAENISDAASAIALTNSAYKPLQRSNLYNM
RLWTLDIVAGNSIVGAGGGNDGLETITLSNFNATADNPLALEIWRGCNPGILYCNTALKA
LPSANIPEDIKNRCIGEAKFLRAHYYFLLVQLFGDVPLQLDPKESLTNKTPFRQSKMKIY
NEVIILDLREAFNLLPTREQYSNADKGRATKGAAAGMLAKVYLTLGRYSEALEMCNAVEN
LGYTLNPDYSDCFGAAERNKNTAESIFEIQYYGLTKDDFWGEENQASWLSTFMGPRNSGW
VGGAYGWNQPTQEFVDQYEAGDLRKDKTILYEGCPNFEGNAYRASMSNTGYNVRKFLVPL
SQSPDFNTNPANFVALRFADVLLMKAEALNELGRTTEAEVPLYKVRTRAGLTRRADIENL
TQAQMREKIRHERRIELAFEGHRWFDMIRWDNGQYALNFLHSIGKTNAREKHLLLPVPQK
DIDANPNLTQNPGW
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatattatacatcaccctattagcatttccgctcttcacggcttgctctaaa
ttcttagacaagaccccttacgaagattcaagtgctgaaaacataagcgatgcggcatcg
gcaattgcccttaccaattcggcttataaacctttgcaacgctctaacctctacaatatg
cgcctctggacgctcgacatcgtagcaggtaacagcatcgtaggcgctggaggtggtaac
gacggactcgagactatcactctttccaacttcaacgcaactgccgataaccctttggcg
ctcgaaatatggcgcggttgtaaccctggtattctctattgcaatacggctctaaaagct
ttgccttctgccaatattcctgaggatatcaaaaaccgctgtatcggtgaagccaaattc
ctccgcgcgcactactatttccttttggtgcaactctttggcgatgtacctcttcagctc
gaccctaaagagagtttgactaacaaaacgcctttccgccaaagcaaaatgaagatatac
aacgaggtgattatcctcgacctcagagaggctttcaacctattgcctacacgcgagcaa
tatagcaatgccgataaaggtcgcgccaccaaaggtgctgctgcgggtatgctcgccaaa
gtatacctcactttgggcagatatagcgaagctcttgaaatgtgcaacgctgtcgaaaac
ctcggttataccctcaatcctgattattccgattgctttggcgctgccgaacgcaacaaa
aacactgccgagtctatctttgaaattcagtattacggacttaccaaagatgatttttgg
ggcgaagaaaaccaagcctcttggctcagtacctttatgggtcctcgcaacagtggttgg
gtaggcggtgcttatgggtggaatcagcctacacaagagtttgtagaccaatatgaggct
ggcgacctccgcaaggataagacgattctctatgagggttgtcctaattttgaggggaat
gcgtaccgcgcttcaatgtctaacacgggctacaatgtgcgcaagtttttagtgcctcta
agtcagtcgcccgatttcaataccaaccctgccaactttgtagcactccgctttgccgat
gtactcttaatgaaagctgaagctctcaacgaattgggtcgcactacggaagctgaagtg
cctttgtacaaagtgcgcactcgtgcgggtcttactcgtcgtgccgatatagagaacctc
acccaagcgcaaatgcgtgagaaaatacgccacgaacgccgtatagaactcgcttttgaa
gggcatcgttggtttgatatgattcgctgggacaacggtcagtatgcactcaatttctta
cactctataggcaaaaccaacgcccgcgagaaacacctgctcttgcctgtccctcaaaaa
gacatcgatgccaaccccaaccttacccaaaaccctggttggtag
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