Capnocytophaga ochracea: Coch_1092
Help
Entry
Coch_1092 CDS
T00961
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc03030
DNA replication
coc03410
Base excision repair
coc03420
Nucleotide excision repair
coc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Coch_1092
03410 Base excision repair
Coch_1092
03420 Nucleotide excision repair
Coch_1092
03440 Homologous recombination
Coch_1092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coc03032
]
Coch_1092
03400 DNA repair and recombination proteins [BR:
coc03400
]
Coch_1092
Enzymes [BR:
coc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Coch_1092
DNA replication proteins [BR:
coc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Coch_1092
DNA repair and recombination proteins [BR:
coc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Coch_1092
NER (nucleotide excision repair)
GGR (global genome repair) factors
Coch_1092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
HHH
Pro-kuma_activ
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ACU92647
UniProt:
C7M492
LinkDB
All DBs
Position
1291163..1293961
Genome browser
AA seq
932 aa
AA seq
DB search
MKKRLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAILGFMNSLLEVIKKEKPDHLAVAF
DKGGSVERTELFADYKANREETPEAIRLAIPYIHEILKALHIPIIEKEGYEADDIIGTLS
KQAEKQNYLVYMVTPDKDYAQLVSDNIFIYRPSRGGNDVEIWGVKEVQEKFEVQNPLQVI
DFLGMMGDAVDNIPGLPGVGEKTAKKLLADFGSMENLLAHTDQLKGKLRENIESNKEKGI
LSKQLATIMLDVPVTFDEEDFAMSEPDFEAVGRIFEELEFRQLLQNFLRTYQPQMTTTPP
PLTGNKPTEGQLSLFTQGDLFAQPQVMSEKKNSTNTPHFYQLADTLMAQQLLLQNLLQQT
EVCFDTETTSVNALEAELVGISFCWSAHKGYYVPFPTDKAATTKLLETFRPFFENEHIGK
VGQNLKYDLKVLQNYNIEVRGALFDTMIAHYLLNPDMRHNMDILSETYLNYTPIAIESLI
GKGKAQRSMRTVPLDQVKEYAVEDADVTWQLKNVFKEEMPKVNAEKIYTDLEAPLIKVLA
AMEREGVNLDVPFLKEYAKTLDADIAQLEATIAEQAGENFNLASPKQLGDILFEKLKIDS
KPKKTKTGQYATSEEVLAPFASKHKIVADILEWRQVQKLKSTYVDALPLEVNKLTGRVHT
TYMQTVAATGRLSSNNPNLQNIPIRTPRGQQVRKAFIARNPDYVLLSADYSQIELRIIAA
LSEEHNMIDSFLRNEDIHRSTAAKVFHVPLEEVTREQRSHAKTVNFGIIYGVSAFGLSAQ
TNLSRSESKELIDTYYATYPNLRNYISKQIQFAQEHGYVETVLGRRRYLPDIHSRNQVVR
GAAERNAVNAPIQGSAADIIKIAMIRIQHELIRQQLQTRMLLQVHDELVFDVPKTELNTV
KPLIKEAMESAFTLAVPLVADLGVGDNWLDAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacggcttttcttactcgatgcttatgcccttatttttaggggttattacgct
tttatcaagaacccgcgtatcaactccaaagggttgaacacgtcggctattttgggcttt
atgaactctcttttagaagtaattaaaaaagaaaagcccgaccaccttgctgtggctttc
gacaagggaggaagtgtggagcgcacggaactctttgccgactataaagccaatcgggag
gaaacgcccgaagccattcggttggcaatcccgtatattcacgaaatcttgaaagccttg
catattcctatcatcgaaaaagagggttatgaggctgacgatatcatcgggacactctct
aaacaagctgaaaagcagaactacctagtgtatatggtaacgcccgataaggactatgca
caacttgtgagtgataatatctttatataccgaccttcgcgcggaggtaacgatgtggag
atttggggcgtaaaagaagtacaagagaaatttgaggtacaaaatcctttgcaggtaata
gacttcctcggaatgatgggtgatgcggtagacaatatacctgggcttccaggagtaggc
gagaagaccgctaaaaagctacttgccgactttggctctatggaaaaccttctcgctcat
actgaccagctgaaaggcaaactgcgcgagaatattgagagcaacaaggaaaaaggaatc
ctctctaaacagttggctaccattatgctggacgtgcctgtaacgtttgatgaagaagac
tttgcgatgtccgaacccgattttgaagcggtagggaggatatttgaagagttagaattt
cgtcagttattgcagaactttctcagaacgtatcagccccagatgacaacaacacccccg
ccacttacaggtaataagcccacagagggacagttaagtctctttacgcaaggcgaccta
tttgcccaaccgcaggtaatgagcgagaagaagaacagcactaacacacctcacttctac
caattagccgataccctaatggcgcaacaactgctcttgcagaatttattgcaacaaacc
gaagtgtgttttgataccgaaacgaccagtgtgaacgccctggaagccgaattggtaggg
atttctttctgctggtcggctcacaaaggttattacgtacctttccctactgataaagca
gcaacaacaaaactgcttgaaactttccgtccgttctttgaaaatgagcatattggtaag
gtaggtcagaatttgaaatacgaccttaaagtattgcaaaactacaacattgaggtgcga
ggcgcactcttcgatacgatgatagcccactatctgctgaatccagatatgcgccacaat
atggatatcctcagtgaaacctatttgaactatacccctattgctattgagagtttgata
ggtaaaggtaaggcacaacgctctatgcgtaccgttccactcgaccaagtgaaggaatac
gccgtggaagatgctgatgttacgtggcaactcaaaaacgtatttaaggaggaaatgccc
aaagtgaacgccgagaaaatctatactgatttggaagcgcctttgataaaagtgttagcc
gctatggaacgcgaaggagtgaacctcgatgtgcccttcttaaaagaatacgctaagact
ttagatgccgatatagcacaactcgaagccactatagccgagcaggcaggggaaaatttc
aatttggcatcgccgaaacagctaggtgatattctttttgaaaaactgaaaattgacagc
aaacctaagaagacaaaaacaggtcagtatgctacttccgaagaagtattagcccccttt
gcttctaagcataagatagtagccgatatacttgaatggcgacaagtgcagaagctgaaa
tctacttatgtagatgccttgcctttggaggtgaacaaactcaccggtcgtgtacacact
acctatatgcaaacggtagctgcgacgggtagattgagcagtaataatcctaacttgcag
aatattcctattcgcactcctcgcggtcagcaggtgcgcaaggcgttcatcgcacgtaat
cctgattatgtgcttctctctgccgactattcgcaaatagagcttcgcatcatcgctgcc
ctgagcgaagaacacaatatgattgactcattcctccgcaatgaggatattcaccgttcc
acagctgccaaagtgttccacgtgcctttggaagaggtaactcgcgaacagcgcagtcac
gccaagacagtgaacttcgggattatctatggtgtatcggcatttgggctctcggctcaa
accaatttgagtcgttcagagagcaaggaattgattgacacctattacgctacgtatccc
aatctgcgaaactatatcagtaagcaaatacaatttgctcaagaacacggctatgtagag
accgtattgggaaggcgtcgctatctacccgatattcactctcgtaaccaagtagtgcgt
ggagcagctgaacgcaacgctgtgaatgccccgatacagggctcggctgcggatatcatc
aaaattgcgatgatacgcatacagcacgagttgattcgccaacaacttcaaacccgtatg
ctcttgcaggtgcacgacgagttagtgttcgacgtacctaaaacagagctcaataccgtt
aagcctctgattaaagaagcgatggagagcgcttttactcttgctgttccgcttgtggca
gacttaggggtaggggataactggctcgatgcacactag
DBGET
integrated database retrieval system
