Capnocytophaga ochracea: Coch_1094
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Entry
Coch_1094 CDS
T00961
Name
(GenBank) secretion protein HlyD family protein
KO
K20345
membrane fusion protein, peptide pheromone/bacteriocin exporter
Organism
coc
Capnocytophaga ochracea
Pathway
coc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Coch_1094
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coc02000
]
Coch_1094
Transporters [BR:
coc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Coch_1094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
TerL_ATPase
RSS_P20
DUF4407
Motif
Other DBs
NCBI-ProteinID:
ACU92649
UniProt:
C7M494
LinkDB
All DBs
Position
complement(1294845..1295924)
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AA seq
359 aa
AA seq
DB search
MKHPIYLSILLLLTTVVVALPFIKVPISVSARGVIRSNFEDTELTAPVSGRVVKCFLSQN
NQNVQKGDTLLIITTELLNTQQQLVNTQQQDYNAQLQDLTALVSHKNTPLQTPQYAQERA
AFLERIGQLQAQLSLAKKELDRANQLFSKDVIAKAEYEKIYYRHEELLRQVQSTQQQQYA
QWQAQRTEVERKLQSLQSDEKRLSQEQQNYVVIAPITGTIAQYKGIRQGNFLSQGQTIAT
ISPEQNLIAECLVSPKDIGFIHPSQNVRFQIDTYNYNQWGLLNGSVKEIDKNLVVNEQTG
EGLFKIRCGISKGYLQLKNGYRGNINKGMSFTARFYLTNRTLWQLLFDRTDDWFNPNII
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatcctatctatctgtctatcctcctactccttactactgtagttgttgcgttg
ccctttatcaaagtgcccatatccgtatcggcacgtggggtcatacgctctaatttcgaa
gatacagaacttactgctcctgtgagtggtagggtagtaaagtgctttctctctcaaaac
aaccaaaacgttcaaaaaggtgacaccttgctcattatcactacagaactattaaacaca
cagcaacaacttgtcaatactcaacaacaagattataacgcacaattacaagaccttact
gcattagtctctcacaaaaatacacccctgcaaacaccacaatacgctcaagaaagagct
gcttttttggaaagaataggccagttgcaagcacaattatccttagctaaaaaggaactc
gatcgtgccaatcaactttttagtaaagatgtaatcgctaaagctgagtatgaaaaaata
tactatcgtcacgaagaactcttgcgccaagtgcaaagcacccagcaacaacaatatgcc
caatggcaagcacagcgtacagaagtagaacgcaaattgcagtcattgcaatcagacgag
aagcgcctcagccaagaacaacaaaactatgtggtaatagcacccatcacaggaactatt
gcacagtacaaaggcattcgtcaaggcaactttctctctcaagggcaaactatcgctact
atctctcccgaacaaaacctcatagccgagtgtttagtctctccaaaagacattggtttt
atacacccctcgcaaaacgtacgttttcaaatagatacttacaattataaccaatgggga
ttgctcaacggcagtgtaaaagaaatagataaaaacttagtagtaaatgagcaaacaggc
gaaggcttatttaaaatacgctgtggaatcagcaaaggttatttacaactgaaaaatggc
tatcgtggtaatataaataaaggaatgagttttacagctcgcttttatcttaccaatcgc
accctttggcaactcctcttcgaccgcaccgacgactggttcaatcctaatataatttaa
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