Capnocytophaga ochracea: Coch_1128
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Entry
Coch_1128 CDS
T00961
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coc02000
]
Coch_1128
Transporters [BR:
coc02000
]
Other transporters
Pores ion channels [TC:
1
]
Coch_1128
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ACU92682
UniProt:
C7M4C7
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Position
1340209..1343223
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AA seq
1004 aa
AA seq
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MKVFILPMLLFLCTSLAVAQTYNIKGNVKEAPNSPMMGVSVVVKGTTHGVSTDFEGNFAL
DNVKRGQVLVFSYVGYITQEITVNNGNALNVTLKEDTQTLGEVVVIGYGTQKVKDVTGSV
SVVDAKTITELKPVDAATALQGTTSGVSVNKASGSPGGKINILIRGVSSNGSNEPLVIID
GYEGALNSINPEDIESLTVLKDAQAAIYGIKGANGVVLVTTKGGRKNTPLEVKISSYTGI
QQTTKKLDYMNATEYAALLNESYAANGQALPFGNLASLGKGIDWQDEVFKNSVISDMTAS
ISGGGEKFSYYLGASHLTQDGIVAPEKSNFKRNNVKVSLGADITSKLKMNFTANYYNNKR
KTIEENGLGAVLFNALNFSPTYGLHDEDLTGFLGNEVINPLAQIDNTYNQYDGNGLEGNF
QLSYNLIEGLDLTSRIGFKTYSDEKKDFQPLSFFGTGKIFNRSRSTVTQEKNETHAYTWE
TFATYNKTFWKNHNTSLTVGTSAQRNWGSGLSATGYDVPNNSWDFADIGLTTGTNNSKTD
NSYMNDSRLTSFFGRLQYDFKSKYLLSAMLRRDASSDFPKDNRADLFSSVTAGWKVSDES
FLKESKWIDFLKLRGSYGTLGNNAGKNLYKAILNGEAVYVFNGQIVRGTAVGKLPNPSAK
WEVAEKLDVGFDFNTLKNRLSLVFDYFIENRNDLLISNFPVSGIIGTAAPGASNPTVNAG
NTQNKGFEVALGYRSDVTKPFSWGFNYNVTRLDGKVVSINGDVIPEGGAFSVGQLAPARM
EVGQPIGYFYGLQADGIFQNQAEVDAHPSQLALGAPARIGDIRYKDVNGDGVIDFKDRTY
LGKPTATYYMGLNLNAKYKNFDFSTYMYAELDKEMVRNYERSQPNVNRQRLYLDRWRGEG
TSNSVPRVTTGATTNNLFSSFFVEDASFLRVQNIQLGYSIPASVLESVKMKTFRVYFSVN
NAFTFTKYKGYDPSATSGDAIGGGIDYGFYPQARQFILGFNTSF
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatttattttaccaatgttgctatttttatgtacgagtttggcagtggcacaa
acttataacataaaaggaaatgtgaaagaagctcctaacagtccgatgatgggggtttcg
gtggttgtaaaaggcactacccacggcgtctctaccgatttcgaagggaattttgcctta
gacaatgtgaagagaggtcaggttctggtgttttcgtatgtgggttacatcactcaagaa
atcactgtgaacaatggcaatgcgctgaacgttaccttgaaagaagatacccaaaccctc
ggtgaagtggtagttatcgggtatggaactcaaaaggtaaaggacgtaacaggctctgta
tcagtagtagatgctaaaaccattaccgaactaaagcctgtggatgcggctactgcccta
caaggtactacctcaggggtgagcgtaaacaaggcttcgggctcacctggagggaagata
aacattcttattcgcggagtgagttctaacggtagcaacgagcctttggtaattatcgac
ggttacgaaggggcactgaacagtatcaaccctgaggacatcgagagtcttactgtattg
aaagacgctcaagcggctatctacggtattaaaggcgcgaatggggtagtactggtaact
actaagggtggacgcaaaaacacacctttggaagtgaaaattagctcttatactggtatt
cagcaaactaccaaaaagttggattatatgaacgctaccgagtatgctgccttactcaac
gagagttatgctgccaacggacaggcgttgccttttggcaatttggcttctttgggcaaa
ggcattgattggcaagacgaggtgtttaagaattctgttatttcagatatgacagctagt
atctcgggtggaggtgagaaatttagttattacttaggggcatcacatcttacccaagac
ggtattgtagcccctgaaaagtctaacttcaaacgcaataacgtgaaagtgagtttgggt
gctgatattacctctaaactcaaaatgaatttcacagctaactattataacaacaagcgc
aaaaccattgaggaaaacggcttgggagcagtgcttttcaacgctttgaacttttcgcct
acctacggtttgcacgatgaagatttaacgggctttttgggtaatgaggtaattaaccct
ttggcacaaatagacaatacctataatcagtatgacggtaatggattggaggggaatttc
cagttgagctataatctcatagaaggcttagacctcacttcgcgtattgggtttaagact
tatagtgatgagaagaaagattttcaacctctgagcttttttggtacgggcaaaatcttc
aaccgcagtcgcagtacggtaactcaggaaaagaacgaaacgcacgcttatacgtgggag
acttttgctacttataacaaaactttctggaaaaaccacaacacttcactcactgtggga
accagtgcgcaacgcaactggggcagtggactcagtgctacaggttacgatgtgcctaac
aactcttgggattttgccgatataggtctcactacaggtacgaacaacagcaaaactgat
aactcgtatatgaacgattcgcgtcttacctctttttttggtagattgcaatacgatttt
aagagcaaatacttgctatcggcgatgcttaggcgtgatgcttcttcagacttcccgaaa
gacaaccgcgccgacttgttttcatcagtaacagcaggttggaaagtatccgacgaaagc
ttcttgaaagaaagcaaatggatagacttcctcaaattgcgtggtagctatggtacactg
ggtaacaatgccggtaaaaacctctataaggctattttaaacggggaagccgtttacgtg
ttcaacggacaaatagtacgcggtacggcggtgggcaaattgcctaacccaagtgccaaa
tgggaagtagctgaaaagttagacgttggttttgattttaataccttgaagaaccgatta
tcgttagtattcgattactttatagaaaaccgtaacgatttgctcatttctaattttcct
gtctcaggtattataggaacggctgcaccaggagcatcaaaccccaccgtgaacgctggt
aatactcaaaataagggctttgaggtagccttaggttatagaagtgatgtaacaaaacct
ttttcttggggcttcaactacaatgttactcgtttagacggcaaagtggtatcgattaat
ggagatgtgattccagaaggaggggctttcagcgttggtcagttagcacctgcacgtatg
gaagtggggcaacctattggctacttctatggtttgcaagccgatggaatcttccaaaac
caagctgaggtagatgcacacccttcacaacttgccttaggtgctcctgccagaatagga
gatatccgttataaagatgtgaatggcgatggagtaattgattttaaagaccgcacatat
ttgggtaaacctaccgctacttactatatgggattgaacctcaatgctaagtataaaaac
tttgatttctcaacctatatgtatgccgagctcgacaaagagatggtgcgcaactatgag
cgttcacaacctaacgtaaaccgtcagcgtttatatcttgaccgttggcgtggtgagggc
accagcaatagcgtgcctcgtgtgaccacaggggcgactaccaataatttattctcaagt
ttctttgtagaagacgcctcattcttgcgcgttcagaacatacagttgggctattcgatt
cctgcatcggtattagagagtgtgaagatgaaaaccttccgtgtgtacttttcggtaaac
aacgcctttactttcactaagtataaaggttatgacccctcagctacctctggtgatgcc
attggtggaggtattgattacggcttttatccacaagcccgtcagtttatcttaggattt
aatacttcattttaa
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