Capnocytophaga ochracea: Coch_1262
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Entry
Coch_1262 CDS
T00961
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
coc03021
]
Coch_1262
03009 Ribosome biogenesis [BR:
coc03009
]
Coch_1262
Transcription machinery [BR:
coc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Coch_1262
Ribosome biogenesis [BR:
coc03009
]
Prokaryotic type
rRNA transcription factors
Coch_1262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
KH_1
AF1548-like_C
Myosin_VII_N
S1_2
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
ACU92810
UniProt:
C7M5A7
LinkDB
All DBs
Position
complement(1472227..1473459)
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AA seq
410 aa
AA seq
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MNSLELIESFSEFKDDKLINRETLMAILEEVFRNTLKKKYGSDDNFDIIINPDKGDLQIF
RNRVVVEDGAVTNDNQQIELSVARKIEPDFEVGEDVSEEIKIDDLGRRAILALRQNLISK
IHEYDSMTIYQRFKDLIGQLYVAEIHHIRHKAIILLDDEGNEIILPKEKQIPSDFFKKGE
HVRGIIESVELKSTKPTIIMSRTSPLFLERLFEQEIPEIADGLITINRVVRIPGEKAKVA
VDSFDDRIDAVGACVGVRGSRIHGIVRELGNENIDVLPFTNNPQLLITRALAPARVSSVV
INEEEKRADVYLANEEVSKAIGKSGYNIRLASQLSGYEIDVYREGATEEDIELSEFNDEI
EEWVIEELQKAGLDTAKSVLELSAEDLMQRTDLEEETVNEVLRILAEEFE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtcttgaattaatcgaatcattctcggagtttaaagatgataaactcatcaac
cgcgaaaccttgatggctattttggaagaggttttccgcaataccctaaaaaagaaatat
ggctctgacgataatttcgatattattatcaaccccgataaaggcgacctacaaatcttc
cgtaaccgtgtggtagtggaagacggtgcagtaacgaatgacaatcagcaaattgaactt
tcggtggctcgcaaaattgaacccgactttgaggtgggggaagacgtttcagaagaaatt
aaaattgatgacttgggccgccgtgctatattggcattgcgccaaaacttgatttctaaa
attcacgaatacgatagtatgactatttatcagcgtttcaaagacctgataggtcagcta
tacgtagccgaaatacaccatatccgccacaaagccatcatcttgttagacgacgaaggc
aatgagattatccttcctaaggaaaaacaaattccgtcggacttctttaagaaaggtgag
cacgtgcgcggaattatcgaatcagtagagctgaaaagtaccaaacctaccattattatg
tcgcgtacctctcctctattcttggagcgtttgttcgaacaagaaatccccgagattgcc
gacgggcttatcactattaacagggtggtacgtatcccaggagagaaagcaaaagtggct
gtagattcattcgacgatcgtattgatgcggtaggtgcgtgcgtaggtgtgcgtgggtct
cgtattcacggtattgtgcgcgagttgggcaatgagaatatcgatgtattaccattcacc
aataacccacaactgctcatcacccgtgctttggctcctgcgcgtgtatcttcagtggtt
atcaacgaagaagaaaaacgtgctgatgtgtatttagcaaatgaagaagtttcgaaagcc
attggtaaatcgggctataacattcgcttggcgagtcagctttcaggctatgaaatcgat
gtatatcgcgaaggggcaaccgaagaagatatcgagcttagcgagtttaacgacgaaatt
gaagaatgggtgattgaagaactgcaaaaagcaggacttgatacagctaagagtgtattg
gaactttctgccgaagatctaatgcaacgcactgacctcgaagaagagactgtaaacgaa
gtgctacgcattttggcggaagagtttgaatag
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