Capnocytophaga ochracea: Coch_1374
Help
Entry
Coch_1374 CDS
T00961
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc00061
Fatty acid biosynthesis
coc01100
Metabolic pathways
coc01212
Fatty acid metabolism
coc02024
Quorum sensing
coc04146
Peroxisome
Module
coc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Coch_1374
00071 Fatty acid degradation
Coch_1374
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Coch_1374
09145 Cellular community - prokaryotes
02024 Quorum sensing
Coch_1374
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
coc01004
]
Coch_1374
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
coc04147
]
Coch_1374
Enzymes [BR:
coc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Coch_1374
Lipid biosynthesis proteins [BR:
coc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Coch_1374
Exosome [BR:
coc04147
]
Exosomal proteins
Exosomal proteins of breast milk
Coch_1374
Exosomal proteins of breast cancer cells
Coch_1374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACU92920
UniProt:
C7M5W1
LinkDB
All DBs
Position
1613704..1615476
Genome browser
AA seq
590 aa
AA seq
DB search
MNTVNRLFDIPYYQQSKHPLEVAFATKYNGEWAKTSTAEYIQKANTVSRGLLRLGIEKND
KIAVISSTNRTEWHVLDIGILQVGAQNVPIYPTINLEDFEYILNHSECKYCVVSDKELWE
KISSIQDKLPHLKTIFTFNDVPYAHHWQEILDLGADEGNQAEVEARKDSIQKDDLATIIY
TSGTTSRPKGVMLSHWNIISNILNCQDRLPITEGSTALSFLPVCHVFERMLTYLYQYDCL
SIYFAESLDKISDNLREVKPHIITVVPRLIEKIYDKIFAKGAELKGIKRKLFFWALNLGF
QYEPYGANGAWYQFKLKIARKLIFSKWREALGGRIQMIVSGSAALSPRLAKVFSAAGLKI
MEGYGLTETAPVIAVNRESGRFWKIGTVGKPIVNIEVKIAEDGEILVKGENVMLGYYKDP
EQTDQNITDGFFHTGDIGELDADGFLKITDRKKEIFKTSGGKYVSPQLIENQLKLSRFIE
NAMVVGEGEKMPAAIIQLNFPFVKEWARRHKVKLGKTNEEIIQNQAVHDRIAKEVEKVNN
HLGKWEQVKLFDFTPDEWTIDGGHLTPTLKLKRRVIKEKYIDIYNKFYNK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgtaaatcgtttattcgatataccttattatcaacaatctaaacacccttta
gaggtcgcttttgctaccaaatacaacggtgagtgggcaaaaacctctaccgctgaatat
atccaaaaagcgaataccgtaagccgaggcttattgcgcttaggcattgaaaaaaatgat
aaaatagcggtcatttcaagtactaatcgcaccgaatggcacgtgctcgacatcgggatt
ttacaagtaggcgcacagaatgtacctatctatcccactatcaacttagaggatttcgag
tatatcctcaaccattcggaatgtaaatactgtgttgtttccgataaagaactatgggag
aaaatctcttctatccaagataaattgcctcatctaaaaactatttttaccttcaacgat
gtaccttatgcccaccattggcaagaaatcctcgatttaggcgccgatgagggcaatcaa
gcagaagtggaagcacgcaaagatagcatacaaaaagatgatttagctactatcatctac
acttcgggcactaccagtcgcccaaaaggggtaatgctctcccactggaatatcatctct
aacatactgaactgccaagaccgtttgcctattaccgaaggctctacagcactcagcttt
ttgcctgtgtgccacgtgtttgagcgtatgctcacctatttgtatcagtacgattgtcta
agcatttattttgctgaatctctcgataaaatcagtgataacttacgcgaagtaaaaccg
catatcattacagtagtaccccgactcatagagaagatttacgacaaaatcttcgcaaaa
ggggcagaacttaaaggcattaagcgcaaactcttcttttgggcactcaatttgggcttt
cagtacgaaccttatggtgctaatggggcttggtatcagttcaaactgaaaattgcacgc
aaactcatttttagtaaatggcgtgaagccttaggaggacgcatacagatgattgtctca
ggtagtgctgccctctcaccgcgtttggctaaggtgttctctgccgcagggctcaaaata
atggaaggttatggtcttaccgaaactgctcccgttattgcagtaaaccgcgaatcgggt
agattttggaaaataggtaccgtagggaaacctattgtcaatatagaagtgaaaattgcc
gaagacggtgaaatacttgtgaaaggcgagaatgtaatgttgggctactataaagacccc
gagcaaacagatcaaaacatcaccgatggtttcttccacacaggtgatataggcgaactc
gatgctgatggcttccttaaaatcaccgaccgcaagaaggaaatctttaaaacttcaggc
ggtaaatatgtatcacctcagctgatagaaaaccaactaaaactctctcgttttattgag
aatgcgatggtagtaggcgaaggtgaaaagatgccagcggctattattcagctcaatttc
ccgtttgtaaaagagtgggcacgccgtcataaagtgaaattaggaaagaccaacgaagag
attatacaaaaccaagccgttcacgatcgtattgccaaagaggtagaaaaggtaaacaat
catttaggcaagtgggaacaagtaaaactttttgatttcacccccgatgaatggacgata
gacggcggtcatctcactcctactctcaaactcaaacgacgtgtgattaaagaaaaatat
atagatatttacaataagttctacaataagtga
DBGET
integrated database retrieval system
