Capnocytophaga ochracea: Coch_1419
Help
Entry
Coch_1419 CDS
T00961
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coc03400
]
Coch_1419
DNA repair and recombination proteins [BR:
coc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Coch_1419
Archaeal homologous recombinant proteins
Coch_1419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Nop
Motif
Other DBs
NCBI-ProteinID:
ACU92965
UniProt:
C7M699
LinkDB
All DBs
Position
complement(1661649..1662872)
Genome browser
AA seq
407 aa
AA seq
DB search
MNLLHTADWHLGQTFYQYDRYNEHQYFLDNLLQIIEEQHTDVLLISGDVFDTANPAVASV
KQFYHFLHQATERFPQLQIIAIAGNHDSPVRLEMPQPLLEDTQVHLVGYVKRNEQREIDY
KRLIIPLYERGEVMAYCLAVPFLRLGDTPKNEDTNPDYTQGVEAFYREITEKALAIAKGK
PLIAMGHLHALGAELSDEDTAERPIIGGMEGFKPTSFPNVLQYIALGHIHKAQTLGGKAH
IRYSGSPIPLSFSEKDYQHQVVAFSLEEGRVQDIKTVPIPLHTPMLSVPERPLPVKEVLN
ALASLPKGTTHTPAPYLEVKVLLNEPAPELKNSILKAIAHKHVRLARIDVRYQQQQNTKK
ETLQKEITLNDLQPYEVLQRVYQNKFQKELPEFYKPLFDEAMEKATD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgctacatactgccgattggcacttaggacaaacgttttaccaatacgaccgc
tataacgaacatcaatatttcttagataatcttttgcaaattattgaagaacaacatact
gatgttttacttatcagtggtgatgtgtttgatactgctaaccctgcagtggcatcggta
aagcagttttatcattttcttcatcaagcaactgagcgtttcccccaactgcaaattata
gctattgcgggtaatcacgattcgcctgtacgccttgaaatgccccaaccactcttggaa
gatacacaagtgcatttggtgggatatgtgaaaagaaatgaacagagagagatagattac
aaacgtcttattattccgctttacgaaagaggggaagtaatggcttactgccttgctgtg
ccttttctccgcttaggggatactcctaaaaatgaagatactaaccccgattatactcaa
ggggtggaggctttctaccgcgaaattacggaaaaggctttagccattgccaaaggaaaa
ccgctgattgctatgggacatctgcacgctttgggagcagaactcagcgatgaggacacg
gctgagcgtcctattattgggggaatggaaggcttcaaaccaacgagctttcctaacgtg
ttacaatacattgctttgggacatattcacaaagctcaaaccttaggtggtaaagctcat
atacgctactcgggaagtcctatacccttatcattttcagaaaaggattatcagcatcaa
gtggtggctttttcattagaagaaggacgtgtacaggatattaaaacggtgcctattccg
ttgcatactcctatgttaagcgtgcctgaacgaccactaccggttaaagaagtactgaat
gctttggcttctttgcctaagggaactactcatactcctgctccttatttagaagtaaaa
gtattactaaacgaacctgctcctgaactcaaaaacagcatactgaaagctatcgctcat
aaacacgtacgcttggcgcgtatagatgtgcgctaccaacagcaacaaaacactaaaaag
gaaactttgcaaaaggaaattactttaaacgacctgcaaccttatgaggtactacaaagg
gtttaccaaaataaattccaaaaagaactgcctgaattctataaacctttgtttgatgaa
gcaatggagaaagcgactgattaa
DBGET
integrated database retrieval system
