Capnocytophaga ochracea: Coch_1533
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Entry
Coch_1533 CDS
T00961
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
coc03009
]
Coch_1533
Enzymes [BR:
coc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Coch_1533
Ribosome biogenesis [BR:
coc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Coch_1533
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ACU93078
UniProt:
C7M6V2
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All DBs
Position
1820895..1821542
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AA seq
215 aa
AA seq
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MLYEDNHVIAVNKRVGDIVQGDKTGDTPLSDIVKQYLKQKYNKPGEVFLGVVHRLDRPTT
GVVLFAKTSKALARLNTMFANKQEVQKTYWALVDAKPPVEEDTLTHWLVRNEKQNKSVAY
NKEMQHSKKAVLHYKLLKSYERYYLLEIDLITGRHHQIRAQLAAIELHIKGDLKYGAKRS
NPDGGICLHAYSLSFVHPVKKEPTKIIAEAPFSFL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgctttacgaagacaatcacgttatcgccgtaaacaagcgagtaggcgacatagttcag
ggcgacaagacgggggacactccgcttagcgatattgtcaaacaataccttaaacaaaaa
tataacaaacctggggaggtattccttggagtggtacatcgcttagatcgccctactacg
ggagtggtgctctttgccaaaacctctaaagctctcgcacgcctcaatacgatgtttgct
aataaacaggaagtacagaaaacctattgggcgttggtagatgcaaaacctcctgtcgag
gaagatacgcttacccattggttagtgcgtaatgaaaaacaaaacaagtcagtagcatat
aataaagaaatgcagcatagcaagaaagcggtattgcattataagttattgaaatcgtat
gaacgttattacctattagaaatcgacctcatcacggggcgccatcaccagataagagcg
caattagctgccatagaattgcacatcaaaggagacctgaagtacggtgccaaacgttcc
aatcccgatggaggtatctgtcttcacgcttatagcctgagctttgttcaccctgtaaag
aaagagcctactaagattattgcagaagcccctttctctttcttgtag
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