Capnocytophaga ochracea: Coch_1617
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Entry
Coch_1617 CDS
T00961
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc00260
Glycine, serine and threonine metabolism
coc00460
Cyanoamino acid metabolism
coc00630
Glyoxylate and dicarboxylate metabolism
coc00670
One carbon pool by folate
coc00680
Methane metabolism
coc01100
Metabolic pathways
coc01110
Biosynthesis of secondary metabolites
coc01120
Microbial metabolism in diverse environments
coc01200
Carbon metabolism
coc01230
Biosynthesis of amino acids
coc01240
Biosynthesis of cofactors
coc04981
Folate transport and metabolism
Module
coc_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Coch_1617
09102 Energy metabolism
00680 Methane metabolism
Coch_1617
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Coch_1617
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Coch_1617
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Coch_1617
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Coch_1617
Enzymes [BR:
coc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Coch_1617
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
DksA-like_N
Motif
Other DBs
NCBI-ProteinID:
ACU93162
UniProt:
C7M782
LinkDB
All DBs
Position
1924942..1926216
Genome browser
AA seq
424 aa
AA seq
DB search
MQRDIDIFELIEDERERQELGIELIASENFVSDQVMEAAGSVLTNKYAEGYPGKRYYGGC
EVIDEIEQIAINRAKVLFGAKYANVQPHSGSQANAAVYATCLKPGDKILGFDLSHGGHLT
HGSPVNFSGRLYEPVFYGVEKETGRLNYNNILEIAERERPKMIVAGASAYSRDIDFKCFR
EIADKVGAILFADIAHPAGLIAKGLLNDPIPYCHIVTTTTHKTLRGPRGGLILMGKDFEN
PFDIKTPKGEVRMMSSLIDSAVFPGNQGGPLEHIIAAKAVAFGEALSDDFLYYAIQVQKN
ARKLASVLLAKGYDIISKGTDNHLMLIDLRNKDVSGKEAEEALGKADITVNKNMVPFDTR
SPFVTSGIRVGVSAITTRGLKEADMERIADFIDRAITNRDNDEVLEEIAEEVNMFMEDRP
LFAY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagagacattgatatttttgaactaattgaagacgaaagagagcgccaagagttg
ggaattgagctcatcgcttcagagaattttgtgagtgaccaagtaatggaagcagcaggt
tcggtactgactaacaaatatgctgaaggttatccaggcaagcgttactacggcggttgt
gaagtaattgatgaaatcgagcaaatagctattaaccgcgctaaagtgctttttggtgct
aaatatgccaatgtacaacctcatagcggttcgcaagctaatgcggcagtttatgctact
tgtcttaaaccaggtgataaaattctcggtttcgacctctcacacggtggacaccttaca
cacggctcacctgttaatttttcaggtagattgtacgaacctgtattttatggggtagaa
aaggaaacaggaagactcaattacaacaatatattagaaatagcggaacgagagcgccct
aaaatgatagtagcaggagcttcggcgtattctcgtgatatcgattttaaatgctttagg
gaaatagccgataaggtaggtgctatcctctttgctgatattgcacaccctgcggggctc
attgccaaaggacttttgaacgaccctatcccatattgccatattgtaactactactact
cataaaacactgcgagggcctcgaggaggacttatcttgatgggtaaagattttgagaac
ccttttgatataaagactcctaagggagaagtgcgaatgatgtcgtcacttatagacagt
gcggtattcccaggtaaccaaggaggtcctttggaacatatcatcgcagcaaaagcggta
gcctttggcgaagctctttctgatgattttctctattacgctatacaagtgcaaaagaat
gcgcgtaaattagcatctgttcttttagcaaaaggctatgatatcatctcaaaaggaact
gacaatcacctaatgcttattgatttgcgcaataaagatgtaagtggtaaagaagcagaa
gaagcccttggtaaagcagatattactgtgaacaagaatatggtgccttttgatacccgc
tcgccttttgtaactagtggtattagggtaggagtatcagcaatcactactcgtggactg
aaagaagcggatatggaacgcattgccgactttatagaccgtgcgattactaatcgagat
aatgatgaagtgcttgaagaaatagcagaagaagtaaatatgtttatggaagacagacct
ttgtttgcatattag
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