Capnocytophaga ochracea: Coch_1678
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Entry
Coch_1678 CDS
T00961
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coc02000
]
Coch_1678
Transporters [BR:
coc02000
]
Other transporters
Pores ion channels [TC:
1
]
Coch_1678
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
Plug
CILP
NOMO_3rd
Motif
Other DBs
NCBI-ProteinID:
ACU93223
UniProt:
C7M7M9
LinkDB
All DBs
Position
complement(2003902..2006157)
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AA seq
751 aa
AA seq
DB search
MYKKYIFLLGLLLPLSLFAQNFSKGSVIDENKTPLIGADVYWEGTQIGTSTDNEGAFTLK
RPEGSSTLVVSYVGYKKKTVKVSGNTPLHIQLEPETTLEEVVVSYKRANTMKSQWQVADV
HTMSSGELLKAACCNLSESFSTNPSIDVNFSDAVTGNKQIKMLGLTSPYILMAEENIPTM
RGASQAYGLSFVPGTWIESIQITKGAGSVINGYESISGQINYEIEKPINAIPFFLNLYAS
EDNRYEINAHTNKKLSDKWATTLFAHGNVRQQKADHNHDGFIDNPIGNQINLLNRWQYAD
AQKGWVGFLNLHYMKDERQAGELRFNPLTDKGTTNAWGSEVNSERLSASNKIGYVFPDTP
YKSIGLQNSFQSHKQDSYFGLNRYDIHQKSWYGNLIYNSIITNTKHKFATGLNGTYDDYN
EMLSTRALTEDFSRVDRSVGAFFEYTYDNLSNFSFVAGVRADSHNHLGNFITPRLHVRYN
PWKQATFRVSAGRGKRAANVIAENQQLLASAREFTIVGGDGGKLYGLNPEIAWNYGVSFL
QAFKVLGKNAEFSIDFYRTDFDNQVVVDLDNSPQQALFYNLNGNSFANSLQAEFSITPAK
GLDFKAAYKYYDVQTQFTKGQLEKTLTPKHRWFANVAYETPERHENNHSQWKFDVTFNWL
GEQRLPTTATNPVAYRLSDYAPSFATLNAQITKVFSKTFEIYVGGENITNYKQENGILAA
NDPFGAYFDSTMQYAPAFGQMYYAGLRFKIL
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaaaatatatctttttattagggctgttgttgcccttgtcgctctttgctcaa
aattttagcaaagggtctgtaatcgatgaaaacaagacaccacttataggtgctgatgta
tattgggaaggtacccaaatagggacttctactgataacgaaggagcttttaccttaaaa
cgacctgagggaagttctactttagtagtaagctatgtagggtataaaaagaaaactgtg
aaagtaagcggtaacacacctttacacattcagttagagcccgaaactactttagaagag
gtagtagtaagctacaaacgtgctaatacaatgaaatcgcagtggcaagttgccgatgtt
cacacaatgagcagtggggaactgctgaaagccgcttgttgcaacctatcggagagtttt
tctaccaatccgtcgattgatgtgaacttctcggacgccgttacgggtaacaaacagata
aagatgttaggtttgactagtccgtacatattaatggcagaggagaatatccctacgatg
cgcggagcttcgcaagcctacggactctcgtttgtgcctggtacgtggattgagagtatc
cagattaccaaaggagcagggagtgtgattaacgggtatgaaagtatttcggggcaaatc
aattatgaaatagagaagcctatcaatgccattccttttttcttgaacttatacgcatcg
gaggataaccgctacgaaatcaacgcccataccaataaaaagctctctgataaatgggcg
actaccctctttgctcacggcaatgtgcgtcagcaaaaagctgaccacaatcacgatggt
tttatagataacccgataggtaaccaaattaacttgttgaatcgttggcagtacgccgat
gctcaaaagggttgggtaggctttttgaacctccattatatgaaagatgagcgccaggca
ggtgaattgcgctttaatccgctgactgacaaaggtactaccaatgcttggggcagtgaa
gtaaactccgaacgcctcagcgcatctaacaaaatagggtatgtatttcctgatacgcct
tataagagcataggcttacaaaactctttccaatcgcacaagcaggattcctactttggt
ttgaatcgctatgatatacaccaaaaaagttggtatggcaacttgatatacaactctatc
atcactaataccaagcacaagtttgccacaggactcaatggtacttacgacgattacaac
gagatgcttagtactagggctctcacagaggatttttcacgtgtagaccgctcggtgggt
gccttctttgaatacacttacgacaatttaagcaacttcagttttgtagcaggggtacgc
gccgacagtcataatcacttaggaaattttatcactccacgcttgcacgtgcgttacaat
ccttggaagcaagctacttttagagtatcggcaggacgaggtaaacgagctgccaatgtg
attgctgagaaccaacagctcttggcttctgctcgagagtttactatcgtaggaggtgat
ggtggtaagctctacggtttgaaccctgaaatcgcttggaattacggcgtgagctttttg
caagcgtttaaagtattgggcaagaacgctgagttctccatagacttctaccgcactgat
tttgacaatcaagtagtagtagatttggataactcaccccaacaagccttgttttataac
ctgaatggtaatagctttgctaactctttacaagctgagtttagcatcacacctgccaaa
ggtttggactttaaagcagcctacaagtattacgatgtgcaaacacagtttaccaaagga
caattggagaagacccttaccccaaaacaccgttggtttgccaatgtagcttacgagact
cctgagcgtcacgagaacaaccattcgcaatggaagtttgatgtaaccttcaattggtta
ggagaacaacgcttacctactacggctacgaacccagtggcttatagacttagcgattac
gctccctcatttgctacactcaatgcccaaatcaccaaagtattctctaagacttttgag
atatatgtaggcggtgaaaatatcaccaattataagcaagaaaacggaattttggctgcc
aacgacccttttggtgcgtattttgatagtactatgcagtacgctcctgctttcggacag
atgtattacgcaggactaagatttaaaattctataa
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