Capnocytophaga ochracea: Coch_1773
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Entry
Coch_1773 CDS
T00961
Name
(GenBank) ABC transporter related
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
coc
Capnocytophaga ochracea
Pathway
coc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Coch_1773
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coc02000
]
Coch_1773
Transporters [BR:
coc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Coch_1773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
nSTAND3
AAA_18
T2SSE
DUF87
AAA_30
AAA_22
ATP-synt_ab
NACHT
AAA_23
NB-ARC
AAA_21
DEAD
RsgA_GTPase
AAA_15
AAA_16
AAA_19
AAA_25
DUF6231
TsaE
AAA_5
DO-GTPase2
PufQ
Motif
Other DBs
NCBI-ProteinID:
ACU93318
UniProt:
C7M858
LinkDB
All DBs
Position
2111927..2113672
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AA seq
581 aa
AA seq
DB search
MAHLRHIRKYFYKYKYHLLLGILITIVSRVFSLFMPRYVKNSIAAIEDFAKSANKDASQM
TSLLIEYALIIIGTTIISAVLMFFMRQLIINVSRYIEYDMKNEIFKKYEQLSLSFYKRNR
VGDLMNRISEDVSKVRMYAGPAIMYSVQTITLFACVIPLMFIISPKLTIYTLIPLPILSL
LIYKMSKKINIETMKVQAYLSDLSTFSQETFSGIGVIKSYNNEAATDAQLAVLAEDGRQK
NIKLAKIQAFFIPTMILMIGLSLIFVIFIGGKLYYTGEIQSIGVIVEFSIYVMMLTWPVA
TVGWVSSIVQQAEASQKRINEFLSEVPQIRNQVGELTPIKGDITFDKVFFRYEDTGIEAL
KDVSFHIEAGQTVAVIGKTGSGKTTLLDLIARMYDANQGEVLIGGKPVRELNLHSLRRAI
SVVPQENFLFSDTIRNNLRFGNKNATEEQIIQACQKAVVHNNITEFTHQYDSVLGERGVS
LSGGQRQRVAIARALLKEAEIYLLDDCLSAVDTDTEEKILTNLRDTLKGKTVIIVSHRVS
ITKYADKILMLDKGKLVEQGTKDELLARNGAFKAFYDSQTI
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcacatctgagacatatacgtaaatatttttataaatataaataccacttactactt
gggatactcattaccatagtgtcgcgagtgttttcactctttatgccgcgatatgtaaaa
aactctatcgcagccattgaggactttgctaaatcggctaacaaagatgcctcacaaatg
acttccttacttatagaatacgcacttattatcatcggtacaactatcatatcggcggtg
ctgatgttctttatgcgtcagcttatcatcaatgtatctcgttacatcgaatacgatatg
aaaaacgagatatttaagaaatatgaacagttatcgcttagcttctacaagcgcaaccga
gtaggtgacctgatgaaccgtatcagcgaggatgtatcgaaagtgcgtatgtacgcaggt
cctgctattatgtatagtgtgcaaactattacactttttgcttgcgtaattccgctaatg
tttatcatctctcccaaacttactatctacacccttatcccattgcctattctctctttg
cttatctacaaaatgagcaaaaagattaatatcgaaacgatgaaggtacaagcctaccta
tctgacctttctactttctcgcaagaaactttctcaggtatcggggtgataaaatcgtat
aataatgaggcggctaccgatgcgcaattagcagtactcgccgaagatggtcgtcagaaa
aacatcaagctcgctaagatacaggctttctttatccctacaatgatactgatgatagga
ttgagccttatctttgtaatctttattgggggaaagctctattacaccggtgaaatacaa
tctattggagtaattgtagagttcagtatttacgtgatgatgctcacttggcctgtggct
accgtaggttgggtaagttctattgtacaacaagcagaagcctcacaaaagcgcatcaac
gagtttctttccgaagtacctcagatacgcaatcaggtaggagagcttacgcctattaaa
ggagatattacatttgataaagtatttttccgttatgaagatacggggatagaagctctc
aaagatgtatctttccatatagaagcaggacaaacagtagccgttataggcaaaaccggt
agtggtaagactacattgttagacctcattgcacgtatgtacgatgcaaatcagggtgaa
gtactgataggaggcaaacccgtaagagaattgaatctacacagcttgcgcagagccatt
tcggtagtgccacaagagaactttttgttttcggacactattcgcaacaatctgcgcttt
ggcaataaaaatgctaccgaagaacagataatacaagcctgccaaaaagcagtggtacac
aacaatattacagagttcacccatcaatacgactcggtgcttggagagcgcggggtatca
ctcagtggcgggcaacgccaacgagtagctatcgcaagagcattgcttaaagaagccgaa
atttatttgttagacgattgtttatcagccgtagatactgataccgaagagaagatttta
actaatttgcgcgataccttaaaaggcaagaccgtaattatagtgagtcatcgtgtgtct
atcactaaatacgccgataaaatactgatgctcgacaaaggaaaattagtagaacaaggt
accaaagatgagctattggcacgaaatggtgcttttaaagctttttatgattcacaaacg
atataa
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