Capnocytophaga ochracea: Coch_1844
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Entry
Coch_1844 CDS
T00961
Name
(GenBank) Polyprenyl synthetase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc00900
Terpenoid backbone biosynthesis
coc01100
Metabolic pathways
coc01110
Biosynthesis of secondary metabolites
Module
coc_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Coch_1844
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
coc01006
]
Coch_1844
Enzymes [BR:
coc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Coch_1844
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Coch_1844
2.5.1.29 geranylgeranyl diphosphate synthase
Coch_1844
Prenyltransferases [BR:
coc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Coch_1844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ACU93389
UniProt:
C7M8L0
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All DBs
Position
complement(2205739..2206704)
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AA seq
321 aa
AA seq
DB search
MLSIEEYKTAFLQHIEKIFTPKEPIHLYEPIQYILNLGGKRIRPLLTLIATDIFGKDYCK
ALNAATAIEVFHNFSLIHDDIMDNASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLED
YPSEIFQELVKTLSETALKVCEGQQMDMDFEKLQEVSIEAYMQMISYKTSVLIGAALQMG
SIISETTKENQMNMYNFGLNLGIAFQLQDDYLDTFGDASFGKKIGGDIIENKKTILYLKS
LALSNEKQREELLRAYALNEVDNKIARVREIFQITNADKAVRQLIENYTQKALMILEKIT
IGDDKREYLRTFALQLMDRKI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgattgaagagtataaaacagcttttttacagcatatagaaaaaatttttact
cccaaagagcctattcacctctatgaacctattcagtacattcttaacttaggaggaaag
cgtattcgtcctttacttactcttattgcaaccgatatttttggtaaagactattgcaaa
gcacttaatgcagctactgccatagaggtttttcacaacttttcacttattcacgacgat
attatggataatgcttctctaagacgtggcaaacctactgttcatcaaaaatgggataca
aatgtaggtatactttcgggagatgctatgcttatcattgcctataaattattagaggat
tatccttcagaaatatttcaagaattagtaaaaacattaagtgaaacagctcttaaagta
tgtgaaggacagcaaatggatatggattttgaaaaactacaagaggtaagtattgaggca
tatatgcaaatgatttcatacaaaacttcagttcttataggagctgccttacaaatgggt
agtattatctctgaaactactaaggaaaaccaaatgaatatgtacaattttggtttaaat
ttaggaatagcttttcagttacaagatgattatttggatacttttggagatgcttcattt
ggtaaaaaaataggaggtgatattatagagaataagaaaactatactctatttaaaatct
ttagcactaagcaatgaaaaacaacgtgaagaactattgagagcatatgctttaaatgaa
gttgataataaaatagcaagagtaagagagatttttcagataacaaatgcggacaaagca
gttcgccaactgatagaaaattatactcaaaaagctcttatgatattagagaaaataact
ataggagatgataaacgagaatacctcagaacttttgccctacaattaatggatagaaaa
atataa
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