Capnocytophaga ochracea: Coch_1856
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Entry
Coch_1856 CDS
T00961
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc00920
Sulfur metabolism
coc01100
Metabolic pathways
coc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Coch_1856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coc03400
]
Coch_1856
Enzymes [BR:
coc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Coch_1856
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Coch_1856
DNA repair and recombination proteins [BR:
coc03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Coch_1856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACU93401
UniProt:
C7M8M2
LinkDB
All DBs
Position
complement(2218740..2219747)
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AA seq
335 aa
AA seq
DB search
MNIYDIENVKLLLKKQLKISIIPHKSPDGDAIGSCLGLYLYLKQLHQDVTVVSPNDFPDY
LKWLPSADEILIYDNAPEKAKKQIENSTLIFTLDFNSLKRADGLTPLLENSAATFVMIDH
HQAPEAYAKVTFSNPNASSTCAMVYSFIDAMGDKNQIDREIATCLYTGIMTDTGNFKYPT
TTSNTLKIAAFLIEKGAKNSQINSNVFDNNSFNKLQLLSVVLKNMTYLKEYDTAYTTLSS
EELQQYDCQKGDTDGFVNYGLTIKNTKLAVIFIQEGDFIKMSLRSKGNNDVNLFARKYFN
GGGHINAAGGRFNGTMEEAVTYFKQVLPDFIHKNI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatatgatatagaaaacgttaagctactacttaaaaaacagttgaaaataagt
attattcctcacaaaagccctgatggagatgccatagggagttgcttgggactatacttg
tatttaaagcaattgcaccaagatgtaacggtggtgtcgcccaatgattttcctgattat
ttaaaatggttaccctcagccgatgagattctcatctatgacaatgctcctgaaaaggca
aaaaaacaaatagaaaactctacgctcatctttacgcttgatttcaattcgcttaaacgc
gctgatgggctcacacctttattagaaaactcggcagctacatttgtgatgattgaccat
catcaagcacctgaggcttatgccaaagtaactttctctaaccccaatgccagctctacc
tgcgcaatggtatattcgtttattgatgcaatgggcgataaaaaccaaatagatagagaa
atagctacttgtttgtacacaggaataatgaccgatacgggaaattttaaataccccacc
actactagcaatacgctaaaaatagctgcttttcttatcgaaaaaggagctaaaaacagt
cagattaacagtaatgtgtttgataataattcatttaacaaattgcaattactgagtgta
gttctgaaaaatatgacgtatttaaaagagtacgacacggcttacacaacgcttagttcc
gaagaactacaacaatatgactgccaaaaaggagatactgacggtttcgtaaattatggg
cttaccattaagaacaccaagctggcagtaatcttcattcaagaaggcgattttataaaa
atgtcattgcgttccaaaggtaataacgatgtaaatctgtttgcacgcaaatatttcaat
ggcggagggcacatcaatgctgcaggaggtagatttaacggtacaatggaagaagcagta
acttattttaaacaagttttgccagattttattcacaagaatatttaa
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