Capnocytophaga ochracea: Coch_1880
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Entry
Coch_1880 CDS
T00961
Name
(GenBank) transcriptional regulator, DeoR family
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
coc03000
]
Coch_1880
Transcription factors [BR:
coc03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Coch_1880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
Put_DNA-bind_N
Fe_dep_repress
HTH_24
MarR
HTH_5
HTH_Mga
EAP30
MarR_2
HTH_34
HTH_36
LexA_DNA_bind
Rrf2
bMERB_dom
HTH_41
DUF7342
Ribosomal_S25
RepB_C
FUR
NUMOD1
DDRGK
RPA_C
DnaD_N
HTH_PafC
TrmB
FeoC
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ACU93425
UniProt:
C7M8P6
LinkDB
All DBs
Position
2253699..2254463
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AA seq
254 aa
AA seq
DB search
MKVLNERQSKILESLETKKYVSVNELSDRLKVSVVTIRKDLNLLEQEGYLHRTHGGASKQ
MRYVFEQTITEKETQNVEEKTRIITKALDFIKENEFIILSSGTTANLLAQKIYGIRNLTV
LTPSLRVALEVCKNPSVNTIHLGGEVRKNSTSTIGVLAEETLSNFSCTTLFLGVEGIDLD
YGLSSTNVGEAHLNRKMMERVDKTIVLADSSKIHKRGFGFICYVEKIDMLITDAGADPEF
VEELEKRGVEVIIC
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtacttaatgaacgacaatcaaagattttggagagcttagaaaccaaaaagtac
gttagtgtaaatgaattgagtgataggcttaaagtttcggtagttactatacgtaaagac
cttaatctcttggaacaggaaggctatttgcatcgtactcacggtggagctagtaaacaa
atgcgctatgtgtttgagcaaacaataactgagaaagaaactcaaaatgtagaagagaaa
acgcgtattattactaaagcgttggactttattaaagaaaatgagtttatcatactttca
tcaggaactacagctaatcttttagctcaaaaaatttatggcatacgcaaccttacagta
ctcactccttccctcagagtagctttagaagtctgcaaaaatcctagtgtaaataccatt
cacttaggaggagaagttcgtaaaaactctacctccactattggcgtacttgctgaagaa
actcttagtaacttctcttgtactactttatttttaggcgttgaaggtattgaccttgat
tatggattgagttcaaccaatgtaggagaagcccatctaaatcggaagatgatggaacgc
gtagacaaaacgattgttttggctgactcctctaaaattcacaaacgaggctttggtttt
atctgttatgtagagaaaatagatatgcttatcactgatgcaggtgctgaccctgagttt
gtagaagaacttgaaaaacgcggtgtagaagtaattatttgttaa
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