Capnocytophaga ochracea: Coch_1904
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Entry
Coch_1904 CDS
T00961
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coc03016
]
Coch_1904
Transfer RNA biogenesis [BR:
coc03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Coch_1904
Prokaryotic type
Methyltransferases
Coch_1904
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
GTP_EFTU
RsgA_GTPase
Arf
ABC_tran
AIG1
Roc
AAA_15
AAA_29
DO-GTPase2
ABC_ATPase
AAA_18
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACU93449
UniProt:
C7M8S0
LinkDB
All DBs
Position
complement(2291798..2293216)
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AA seq
472 aa
AA seq
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MKRENSLYINDTIVALATASGVGAIAVIRLSGKEAITIADSVFKPHSGKSLLEAPSHTVH
LGTLESKDQVIDECLATIFKGTKSYTGEPVVEFSCHGSNYIVEEVIKLCLAKGARLADAG
EFTKRAFLNGKLALNQAEAVADLIASDSKASHQVALQQMRGGFTSEIEGLRQELLNFTSL
IELELDFSEEDVEFADRTQFKTLLSTIKTIVLSLLQSFSVGNVLKNGIPVAIVGKPNAGK
STLLNALLNEERAIVSDIAGTTRDTIEETLHIGGIAFRFIDTAGIRDTQDQIEAIGVQKA
KEKIEKASIVLYLFDVKDSSAQEIISFVKENYREGTKFVLLHNKTDLSTESNITPFDNEI
LQSLQGYTDTLLRISAKEGNNILALKDFLSHYAQSLNNTGKATIITNIRHYEALHNTLQS
IERIEQGIQLQLSGDLLAIDIREALYHLGSITGTVSNDEVLGNIFSRFCIGK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagagaattcgttatatataaatgatacgattgtagctttggcaactgcttca
ggggtcggtgctattgctgtaattcgcctatcgggaaaagaagccataaccatagccgac
tcggtgtttaagcctcatagtggaaaatctttacttgaagctccgtcacatacagttcat
ttaggaactctcgaaagtaaagaccaagtaatcgacgagtgtttggctactattttcaaa
ggaactaaatcttatacaggtgagcccgtagttgagttttcgtgtcacggaagtaattat
atcgtagaagaagttatcaagctgtgcttggcaaaaggagctcgtttagccgatgctggg
gagtttaccaaacgtgcttttctcaatggcaaattagcactcaatcaagcggaagccgtt
gccgatttgattgcctccgatagtaaggcttctcatcaggtagcattacagcaaatgcga
ggtgggtttacttctgagatagaaggattacgacaagaattattgaactttacctcatta
atagaacttgaattagacttttcggaagaagatgtagagttcgccgatagaactcagttt
aaaacacttttgagcactattaaaaccatagttttatctctcttacaatcattttcagta
ggtaatgtactaaaaaatggtattcctgtcgctattgtaggcaagcctaatgcaggcaaa
tctactttattaaatgcccttctgaacgaagaacgcgctattgtatcggatattgcaggt
actacccgcgatactattgaagaaacgcttcatataggaggtattgcttttcgttttatt
gataccgcaggaattcgtgatactcaagaccaaatcgaagctataggtgtacaaaaagct
aaagaaaagatagaaaaagcctctattgtgctctacttattcgatgtaaaagatagttct
gcccaagagattatttcttttgtaaaagaaaattaccgcgaaggaactaaatttgtacta
ttacacaacaaaactgacttatcaacagaaagtaatataactccttttgataatgagatt
ttacaatccttgcaaggctatactgatacactactgagaatatcagctaaagaaggaaac
aatattttagcccttaaagattttctctctcactatgctcaaagtcttaataatacaggt
aaagcaactattattactaatatccgccactacgaagctctacacaataccttacaaagt
attgaaagaatagaacaaggaatacaattacaactttcaggtgacctattagctatcgat
atccgcgaagctctctatcatttaggttctatcacaggaactgtaagcaatgatgaggtc
ttaggaaacatcttttcccgcttctgtatcggcaaataa
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