Capnocytophaga ochracea: Coch_1933
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Entry
Coch_1933 CDS
T00961
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coc03016
]
Coch_1933
Enzymes [BR:
coc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Coch_1933
Transfer RNA biogenesis [BR:
coc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Coch_1933
Prokaryotic type
Coch_1933
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF7045
PMI_typeI_hel
Motif
Other DBs
NCBI-ProteinID:
ACU93478
UniProt:
C7M8U9
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All DBs
Position
complement(2317834..2318586)
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AA seq
250 aa
AA seq
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MRYFIELSFFGKNYYGWQFQPKAISVQEVLQKALSTLLRTPIEVVGAGRTDSGVHALQMY
AHFDVTEALPANLVHKLNAFLPKDIAVHHIYEVQPNAHARFDALKRTYQYHISTQKDAFA
YDYAMALTLPLNVALMNEAAQILFDYTDFQCFSKTHTDVKTYNCKIYEAHWDKVENQLIF
TITADRFLRNMVRAIVGTLIDVGLQKLSLTDFEDIILSKKRSKAGASVPACGLYLTHIEY
PESLFVEKKD
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcgttattttatagaactttctttctttggtaaaaactattacggttggcaattccag
cccaaagctatttcagtgcaagaagttttacagaaggctctttctactcttttgcgaacg
cctatagaagttgtgggagcaggtcgcactgatagtggtgtgcacgctttgcagatgtat
gctcactttgatgtgacagaagcgttgcccgctaatctggttcacaagttaaatgctttt
cttccaaaagatatagctgttcatcatatatatgaagtacagcctaatgcccacgcccgt
tttgacgctttgaaacgcacttatcagtaccatattagtactcaaaaagatgcttttgct
tacgattatgcgatggcacttactcttccgttaaatgtagcgcttatgaatgaagcggct
caaatactttttgattatactgattttcagtgcttctctaaaacacataccgatgtaaag
acatataattgcaaaatatacgaagcgcattgggataaggtggagaaccaactcattttt
actattactgccgaccgtttcttgcgcaatatggtacgggcgattgtaggaacacttata
gatgtaggcttacagaaactttcgcttacagattttgaagatattatcctcagtaagaaa
cgcagtaaagcaggagcatcggttcccgcttgtgggttatatctcactcatatagaatac
cccgaaagtctctttgttgaaaaaaaggattaa
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