Capnocytophaga ochracea: Coch_2057
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Entry
Coch_2057 CDS
T00961
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc00541
Biosynthesis of various nucleotide sugars
coc01100
Metabolic pathways
coc01250
Biosynthesis of nucleotide sugars
Module
coc_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Coch_2057
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
coc01005
]
Coch_2057
Enzymes [BR:
coc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Coch_2057
Lipopolysaccharide biosynthesis proteins [BR:
coc01005
]
Lipid A
Coch_2057
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF5091
Motif
Other DBs
NCBI-ProteinID:
ACU93601
UniProt:
C7M3H5
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All DBs
Position
2463729..2464520
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AA seq
263 aa
AA seq
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MINKEDNFFLLAGPCAIEGEDMAMKIAEHIVNITHKLNISYIFKGSFKKANRSRVDSFTG
IGDEKALKILQKVGQTFNVPTVTDIHQVSDAAMAAEYVDVLQIPAFLVRQTDLVVAAAET
GKVVNLKKGQFMSPESMQFAVQKVFDSGNEKALITDRGTMFGYQDLIVDFRGIPTMRKFA
PVVMDVTHSLQQPNQSSGVTGGRPDMIETIARAAIVNNADGLFIETHFDPANAKSDGANM
LHLDLLEGLLTRLVAIRKTINEF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaaagaagataatttctttctcttagcgggaccttgtgccatagaaggagag
gatatggcgatgaaaattgctgaacatatagtgaatatcactcataaactgaatatatcc
tacatttttaaagggagttttaagaaagccaataggagtcgcgtagattcgtttacgggc
ataggcgatgaaaaggcactaaaaatactccaaaaagtagggcaaacctttaatgttcct
actgttactgatattcatcaggtgagcgatgcggcgatggctgccgaatatgtagatgta
ctgcaaataccagctttcttggtgcgccagactgatttggtggtggcagcagccgaaacg
ggcaaggtagtgaacctgaaaaaaggtcagtttatgagtcctgagagtatgcaatttgcc
gtgcaaaaagtatttgatagtggcaatgaaaaagcgttgataactgaccgtggcacgatg
ttcggttatcaagacttgatagtagattttcgcggaattccgacgatgcgcaagtttgct
cccgtagtaatggacgttacgcactcgctacaacaacctaaccaaagtagtggggtaaca
ggcggtcgcccagatatgattgaaaccattgcccgcgctgctattgtgaacaatgctgat
ggactttttatcgaaacccattttgaccctgctaatgccaaaagtgatggggcaaatatg
ctacatctcgacctccttgaaggtcttttaacgcgtttggttgccattcgcaaaacaatt
aacgaattttaa
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