Corynebacterium pseudotuberculosis 1/06-A: Cp106_0228
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Entry
Cp106_0228 CDS
T02052
Symbol
rmlB
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cod
Corynebacterium pseudotuberculosis 1/06-A
Pathway
cod00521
Streptomycin biosynthesis
cod00523
Polyketide sugar unit biosynthesis
cod00525
Acarbose and validamycin biosynthesis
cod00541
Biosynthesis of various nucleotide sugars
cod01100
Metabolic pathways
cod01110
Biosynthesis of secondary metabolites
cod01250
Biosynthesis of nucleotide sugars
Module
cod_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cod00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Cp106_0228 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Cp106_0228 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
Cp106_0228 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Cp106_0228 (rmlB)
00525 Acarbose and validamycin biosynthesis
Cp106_0228 (rmlB)
Enzymes [BR:
cod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Cp106_0228 (rmlB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AER68336
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Position
complement(236185..237189)
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AA seq
334 aa
AA seq
DB search
MRKNLLVTGGAGFIGSNFVRRTLETRSDYRVRVLDKLTYAGNSANLDGCDAELVEGDICD
AALVDKLLSDADVVVHFAAESHNDNSLEDPSPFIHTNVVGTFTLLEAARRHRVHLHHVST
DEVFGDLELEDPNRFTERTPYNPSSPYSASKAGSDHLVRAWVRSFDVSATLSHCSNNYGP
YQHIEKFIPRQITNILSGIPPKLYGTGEQVRDWIHVDDHNDAIHAILDRGRIGESYIIGA
DNDHVNNKQVIELICHLMGADSYEHVADRPGHDMRYAMDSTKLRTELGWKPRFTDTATGM
REGLSHTIQWYRDNEHWWRPLKDTVENNYAKRGQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaagaatttgcttgttaccggcggcgccggctttatcggttctaattttgtccgc
cgtactctagaaacccgcagcgattatcgcgtgagggtattagacaagctgacgtatgca
ggaaatagcgctaacctcgatggctgcgacgctgagctggtcgaaggcgatatttgcgat
gctgcgctcgtcgataagcttttgagcgatgcggacgtggtagtgcattttgctgcagag
tctcacaatgataactccctggaagatccttctccgtttattcataccaacgtagtgggc
acgttcacgctgctggaagctgctcgacgccaccgtgtgcatcttcatcacgtttctacg
gatgaggtcttcggcgatctcgagcttgaagaccctaaccggttcacagagcgcacccct
tacaatccttcctccccttattcagcgtccaaggcgggttctgatcatttggttcgagca
tgggtgaggtcttttgatgtctcggctactttgtctcattgctcgaacaattatggtcct
taccagcacattgagaagtttatcccccggcagatcaccaatatcttaagcgggattcca
cccaagctctatggcacgggtgaacaagtgcgagactggatccatgtagacgatcacaac
gatgctatccatgcgattcttgatcgtggtcgcatcggtgagtcctatatcatcggtgcc
gacaacgaccacgtgaataataaacaagtcatcgagttgatctgccatctcatgggggca
gattcttatgagcacgtcgccgataggccaggtcatgacatgcgttacgctatggattcc
accaagctacgcacagagctgggttggaagcctcgattcacagacactgccaccggcatg
cgcgagggtttgagtcatactattcagtggtatcgcgacaacgagcactggtggcgtcct
ctcaaagacaccgtggaaaacaactatgccaagcggggtcagtga
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