| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
cod Corynebacterium pseudotuberculosis 1/06-A
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cod00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cp106_0315 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cod03021]
Cp106_0315 (rpoC)
03400 DNA repair and recombination proteins [BR:cod03400]
Cp106_0315 (rpoC)
Enzymes [BR:cod01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cp106_0315 (rpoC)
Transcription machinery [BR:cod03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cp106_0315 (rpoC)
DNA repair and recombination proteins [BR:cod03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cp106_0315 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
331821..335831
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| AA seq |
1336 aa
MIDVNFFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITGVDEEARHSDQTTLEAEMLLEKKDVEADAKSEIAERAQKLEED
LAELEAAGAKADARNKVQKAADKEMQHIRERAEREIDRLEEIWQTFIKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELREIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKTEGEIGGQ
GAYQPATEDGPATGVYSSYAEALMARDRGVLGLQAKIRVRISHLRPPVEVEAEQFPEGWE
QGQTWLADTTLGRIMFNELLPWNYPYLEGVMVRKGGGSNKILLGDVINDLAATYPMITVA
QTMDKMKDAGFYWATRSGVTITMSDVLVLPNKEEILDRYEAEAAKIERKYWEQGALTERE
RYDRLVELWKEATDEVGNAVEKLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCGTKQGIRVPVAVEVKDAQGNVTGYTGHSLIETSVAGRVASVDIKDSEGNVLVPAGENL
TDQLIEKLIAAGVAEVKVRSVLTCQTPTGVCAKCYGKSMATGKLVDIGEAVGIVAAQSIG
EPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTVHLEDEGNFYTL
TINPDDGSDVVVYEKLSKRQGLATVRVPMESNPGAMIERTLSEGDHVNVGDRLLRGPADP
HDVLEVLGRRGVEQHLVDEVQDVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPG
TLVDLSEAKAANAEAIAAGGHPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAI
NKRSDKLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDSY
GEFTGASVPLDEAYDL |
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| NT seq |
4011 nt +upstreamnt +downstreamnt
gtgatcgacgtcaacttcttcgacgagctccgcatcggcctggctactgccgacgacatt
cgtcgttggtccaaaggcgaggtcaaaaagccggagaccatcaactaccgcaccctgaag
ccggagaaggacggcctcttctgcgagcgaattttcggcccgacccgcgactgggagtgc
gcttgcggtaagtacaagcgtgtccgttacaagggcatcatctgtgagcgctgtggcgtt
gaggtgaccaagtccaaggttcgccgtgaacgcatgggccacatcgaactggctgcgccc
gtcacccacatttggtacttcaagggtgtcccgtctcgtctcggttaccttttggacctg
gctccaaaggatctcgagcgcatcatttacttcgcagccaacatcatcactggtgttgac
gaggaagctcgccacagcgaccagaccactcttgaggcagaaatgcttttggagaagaaa
gacgttgaggctgacgcaaagtctgagatcgcagagcgcgctcagaagctggaagaggat
cttgccgagctggaagccgcaggagctaaggccgacgcccgcaacaaggtgcaaaaggct
gcagataaagagatgcagcacatccgcgagcgggctgagcgcgagatcgatcgtcttgag
gagatctggcagacctttatcaagcttgctcctaagcagatgatcattgatgagaccatc
tatgaagaactcgtggatcgttacgaggattacttcaccggtggtatgggcgcggaggcc
atccaaacccttatccgcaactttgacctcgatgctgaggcagaggaactgcgcgagatc
atcaacaatggcaaaggccagaagaagatgcgcgccctcaagcgactcaaggttgttgct
gcattccagcgctcgggcaatgacccagctggtatggtgctcgactgcatcccggtgatc
ccaccggagctgcgtccgatggttcagcttgatggtggccgttttgctacctccgacctg
aacgatctctaccgtcgcgtgattaaccgcaacaaccgcctcaagcgcatgatcgacctt
ggtgctcccgagatcatcgtgaacaacgagaagcgtatgttgcaggagtccgtcgacgcg
ctctttgataatggtcgccgtggtcgtccggtcaccggtcctggcaaccgtccgctgaag
tccttgagcgatttgcttaagggcaagcagggtcgtttccgtcagaacttgctgggtaag
cgtgtcgactactctggtcgttccgttattatcgtcggtccacagctgaagctgcatgag
tgcggtcttcctaagctcatggctcttgagctcttcaagccgtttgttatgaagcgcctc
gtggaaaacgattacgcgcagaacatcaagtcggctaagcgcatggttgagcgtcagcgc
cctgaggtgtgggacgttctagaagaggcaatttctgagcatcctgtgatgcttaaccgt
gcacctaccctgcaccgcctaggcatccaggccttcgagcctaagctcgttgagggtaaa
gctatccagctgcacccactcgcgtgtgaggccttcaacgctgacttcgacggtgaccag
atggctgtgcacttgccgctatctgctgaagcacaggctgaggcgcgcatcctcatgctt
gcctccaacaacattctctccccggcatccggtaagccacttgccatgccgcgtctggac
atggtgactggtctttattacctcaccatggacaagactgagggtgagattggtggtcag
ggtgcataccagcctgctactgaggatggtccagcaacgggtgtgtactcctcctacgct
gaggcacttatggctcgcgaccgtggcgttcttggcctgcaggccaagatccgggtacgc
attagccatctgcgtccgccggtagaggttgaggcagagcagttcccagagggttgggaa
cagggacaaacctggttggctgataccactcttggccgcatcatgttcaacgagctcttg
ccgtggaactacccgtaccttgagggcgttatggtccgtaagggtggaggatcgaacaag
attctcttgggcgacgtgattaatgatctcgctgcgacctatccgatgattactgttgct
cagacgatggacaagatgaaggatgccggtttctactgggcaacccgaagcggcgtgacc
atcactatgtctgacgtgctcgttcttcctaataaggaagaaattcttgaccgctatgag
gccgaggctgcaaagatcgagcggaagtactgggagcagggtgctctgacagagcgcgag
cgctacgaccgtctggtcgagctttggaaggaggctaccgacgaggtcggtaatgccgtc
gagaagctctatccggatgacaacccgattcctatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggacgctggccggcatgaagggcatggttgtgaactcaaagggt
gattacatcacccgaccgattaagacttccttccgtgaaggcctgtcggttcttgagtac
ttcaacaactctcacggttcgcgtaagggcctcgccgataccgctctgcgtaccgccgac
tcgggttacctcactcgtcgtctggtggacgttgcgcaggatgttatcgtccgcgaggat
gactgcggcaccaagcagggcattcgtgtcccagtggccgttgaggttaaggatgctcag
ggcaacgtcaccggttacaccgggcacagcctcatcgagacctctgttgctggccgcgtg
gcttccgttgacatcaaggattctgagggcaacgtcctggtaccagctggtgaaaacctc
accgatcagctcatcgagaagctcatcgccgcaggcgttgccgaggtcaaagttcgctcc
gtgcttacctgccagaccccgaccggtgtgtgcgctaagtgctatggcaagtccatggct
accggcaagctcgttgatatcggagaggcagtgggcatcgtcgctgctcagtccattggt
gagcccggtacccagctgacaatgcgtacgttccaccagggtggtgtcggtggtgacatc
accggtggtcttcctcgtgtccaggagctcttcgaggctcgtgttcctaagaatcgcgct
ccgattgcttctgtggcaggtaccgtacaccttgaggatgaaggtaacttctacaccctc
accatcaacccagacgatgggtcagatgttgtggtctacgagaagctctccaagcgtcag
ggtcttgctaccgtgcgggttcctatggaatccaacccgggtgccatgatcgagcgcacc
ttgtcagagggcgaccacgtgaacgtgggcgatcgtctgctacgcggacctgctgatccg
cacgacgtacttgaggttcttggccgccgtggtgttgagcagcacctcgtggacgaggtt
caggacgtgtaccgcgcacagggtgtggctatccacgataagcacatcgagatcatcatt
cgtcagatgctgcgccgcggcaccgtcatcgagtccggctcgacagagttccttccgggt
actctcgttgacctttcggaggccaaggccgctaacgctgaggctattgctgctggtgga
catcccgctgagctccgttcggagatcatgggtatcaccaaggcatcgttggctaccgag
tcgtggctgtccgctgcgtccttccaggagaccacgcgtgtgcttaccgacgccgccatt
aacaagcggtccgataagctgatcggcctcaaggagaacgtgatcatcggtaagctgatc
ccggcgggtaccggtatttcccgttaccgcaacatctccgtcaaaccgactgaggcagct
cgcaatgcggcttactcaatcccaacgtatggagattccatctatggcgatgacagctac
ggtgagttcaccggcgcttccgtgccactggatgaggcctacgacctctaa |
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