Corynebacterium pseudotuberculosis 1/06-A: Cp106_0384
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Entry
Cp106_0384 CDS
T02052
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cod
Corynebacterium pseudotuberculosis 1/06-A
Pathway
cod03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cp106_0384 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cod03021
]
Cp106_0384 (rpoA)
03400 DNA repair and recombination proteins [BR:
cod03400
]
Cp106_0384 (rpoA)
Enzymes [BR:
cod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cp106_0384 (rpoA)
Transcription machinery [BR:
cod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cp106_0384 (rpoA)
DNA repair and recombination proteins [BR:
cod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cp106_0384 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AER68485
LinkDB
All DBs
Position
393466..394482
Genome browser
AA seq
338 aa
AA seq
DB search
MLISQRPTLTEEYVDSARSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVKIDGVL
HEFTTINGVKEDVSDIILNIKGLVLSSDSDEPVVMYLRKEGAGVVSAGDIEPPAGVEIHN
PDLHIATLNEQGRLDIEMIVERGRGYVPASLYAGTNEIGRIPVDQIYSPVLKVSYKVEAT
RVEQRTDFDKLIIDVETKNSIAPSDALASAGKTLVELFGLARELNTAAEGIEIGPSPQET
EYIAAYSMPIEDLNFSVRSYNCLKRQEIHTVGELAECTESDLLDIRNFGQKSINEVKIKL
AGLGLFLKDSPEDFDPTQLEGYDAATGDYVDTDLEDSE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttcccagcgccccaccctcaccgaggaatacgttgattccgctcgttcgcgc
ttcattattgaaccgcttgagccaggtttcggttacacccttggtaactcgctgcgtcgc
accctgctttcgtccattccgggcgctgcagtgaccagcgtgaagatcgacggtgttctt
cacgagttcaccacgatcaacggtgtgaaagaagatgtctctgacatcatcctgaacatc
aagggtttggttctgtcttctgactctgatgagccagttgtcatgtacctccgtaaggaa
ggcgctggcgttgtatctgctggcgacattgagccaccagcaggcgtggagatccacaac
ccggaccttcatatcgcaactctgaatgagcagggccgtcttgatattgagatgattgtt
gagcgtggccgcggttacgttccagcttctctctacgcaggcaccaatgagatcggtcgc
atccctgttgaccagatctattccccggtgctcaaggtgagctacaaggtcgaagctact
cgtgttgagcagcgcaccgactttgacaagctgatcatcgacgttgagaccaagaactct
attgctccgagtgacgctcttgcgtctgctggcaagaccctggttgagctgtttggcctc
gcacgcgagctgaacaccgctgctgaaggcatcgagatcggcccttccccgcaagagacc
gaatatatcgctgcttatagcatgccgatcgaggatctgaacttctccgttcgctcgtac
aactgcctgaagcgtcaagagatccacaccgttggtgagctcgcagagtgcaccgagtcg
gatctgttggatatccgtaactttggtcagaagtcgatcaacgaggtcaagattaaactc
gctggcttgggtctgttcctgaaggattctcctgaagactttgatcccacccaacttgag
ggctacgacgccgctaccggcgactacgtggacacggatctggaagattccgagtaa
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