Corynebacterium pseudotuberculosis 1/06-A: Cp106_0626
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Entry
Cp106_0626 CDS
T02052
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cod
Corynebacterium pseudotuberculosis 1/06-A
Pathway
cod03420
Nucleotide excision repair
cod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cp106_0626 (pcrA)
03430 Mismatch repair
Cp106_0626 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cod03400
]
Cp106_0626 (pcrA)
Enzymes [BR:
cod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cp106_0626 (pcrA)
DNA repair and recombination proteins [BR:
cod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cp106_0626 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Cp106_0626 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
DEAD
ResIII
OstA_2
Motif
Other DBs
NCBI-ProteinID:
AER68710
LinkDB
All DBs
Position
659756..662113
Genome browser
AA seq
785 aa
AA seq
DB search
MVQGLNPQQQQAVEHSGSPLLIVAGAGSGKTAVLTRRIAYLMRIRGVQPGQILAITFTNK
AAAEMRERVAHLVGPIASRMWVSTFHSTCVRILREQAQLVAGLNSNFTIYDSDDSKRLLA
MISKDMNLDIKKFTPRLLGAGISNLKNELISPATAVAEAESTKNPYETTVAAVYVEYQRR
LRQANAVDFDDLIGETVRIFKEHPQVTEYYRRRFRHVLIDEYQDTNHAQYVLIHELVGTG
ETASELCVVGDSDQSIYAFRGATIRNIEEFERDYPNATTVLLEQNYRSTQTILNAANSVI
SQNENRRKKKLWTALGSGDPITGYVADNEHDEARFIAQEIDALADKGIGYSDMAIMYRTN
NSSRAVEDVFMRSGIPYKVVGGTRFYERKEIRDVIAYLRLLDNPEDTVSLRRIINTPRRG
IGDKAVAFLTLHSENQGVSLQQALIDASEGQVSLLGARGRNAISGFVNMMSGLRDSAAES
VNEITGMPDIGNVIAQILDITGYKAELEKSNDPQDGARLDNLNELVSVAREFSSEAANQV
AYAKMDGSELDDLAAVGEPEPGSLQAFLERVSLVADADQIPDNEQGLVTLMTLHTAKGLE
FPVVFLMGWEDGQFPHLRALGDPKELAEERRLAYVGITRARKALYITRAMLRSSWGNPVT
NPASRFLTEIPQELLDWRREEPESSFDAWGQPSWGRNTGFSSARGDSWGSPRYGASPKPK
KTMPSYAKNSDLSLVVGDRVNHDKYGLGTVTKVDKGSPADSVTIDFGSSGTVRLMLIGSV
PMEKL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
ttggtccaggggcttaatccgcaacaacagcaagcagtagaacacagtggctccccgtta
cttattgtggccggcgcaggttcaggcaagacagcagtacttacgcgccgtatcgcttac
ctcatgcgcatacgaggcgtgcagccagggcagattttagctatcacatttaccaataag
gctgcggctgaaatgcgagagcgcgtggctcatctcgtggggccgatcgccagcagaatg
tgggtgtctaccttccactccacgtgcgtacgcatcttgcgggaacaggctcagctggtt
gctggattaaacagcaatttcaccatctatgactcagatgattcaaagcgattactcgcg
atgatctctaaagatatgaacttagatatcaaaaagttcacgccgcgtttattgggggcg
ggaatctctaacctcaaaaatgagttgatttctcccgccacggcagtcgcagaagccgaa
agtactaaaaatccatatgagacgacggtagctgccgtatacgttgagtatcagcgacgc
ttaagacaagctaacgcggtcgattttgatgacctcatcggagagacagtacgtatattc
aaagagcacccccaagtaaccgaatattacaggcgcagattccgccatgtgcttatcgac
gaataccaggacaccaaccacgcacaatatgtccttattcatgaactggtagggactggg
gaaaccgctagtgaattatgcgttgtcggagattcagatcagtccatttatgccttccgg
ggcgcaactatacgcaacattgaggaatttgagagggactatcccaacgccacgaccgtt
ctcttggagcagaactaccggtcgacacaaacgatccttaacgcggctaactctgtgatc
tcccaaaacgagaaccgacgaaaaaagaaattgtggacggcgctaggtagcggggatcca
atcacagggtatgtcgcagataatgagcatgatgaggcccgttttattgcccaagaaata
gatgcgctcgcagataaaggcattggttacagcgatatggccattatgtatcgcacaaat
aactcatcgcgtgccgtggaagacgtgttcatgcgttctggtattccctataaggttgtg
gggggaacccgattctatgagcgcaaagagatccgggacgttattgcttatctacgttta
ctggataaccccgaagatacggtttctctccgcaggattattaacacgccgcgccggggg
atcggcgataaagccgtagcgtttctcaccctacattcagagaatcaaggagtgagtctc
caacaagcgcttatcgacgcctccgaggggcaggtgagtcttctaggggcgcgcggacgc
aacgcgatttcgggctttgtgaacatgatgtctgggctgagggatagcgcagccgaatcc
gtcaacgagatcaccggtatgccagatatcggcaatgttattgctcaaatacttgatatc
acgggatataaggcagagctggaaaaaagtaacgatccacaagatggtgcacgattagac
aaccttaacgagcttgtctcggttgcccgagagttttcctcagaggcggccaaccaggtg
gcgtatgccaagatggacggcagcgaactcgatgatttagctgctgtgggagaaccagaa
ccgggtagtttgcaggcttttctggagagggtttcccttgtagctgatgccgaccaaatc
cctgataatgagcagggcttggtcactcttatgactttgcatacagccaaaggactagag
ttcccggttgtcttcctgatggggtgggaagacggacaatttcctcacctgcgcgcgctg
ggagatcccaaagaacttgcggaggaacgacggcttgcgtatgtcggaataacgcgcgcg
cgcaaggccctttatataacccgagctatgttgaggtcctcctggggaaatcccgtaact
aacccggcatcaaggtttcttacagagattcctcaagagcttcttgattggcggcgagag
gaaccagaaagttctttcgatgcgtgggggcagccttcctggggcagaaacacaggcttt
agctccgcgcgcggcgattcgtggggatcaccgcgttatggtgccagcccgaaacccaag
aaaacgatgccaagctatgcaaagaacagcgatctttctttggtagtcggagatcgggtt
aatcatgataaatatggccttggtaccgtgaccaaggtggacaaaggcagtccggcggat
tccgtaactattgattttggttcctctggaacagtacggcttatgctgatcggctcagtt
ccaatggaaaagctttag
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