Corynebacterium pseudotuberculosis 1/06-A: Cp106_0821
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Entry
Cp106_0821 CDS
T02052
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cod
Corynebacterium pseudotuberculosis 1/06-A
Pathway
cod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cp106_0821 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cod03021
]
Cp106_0821 (rho)
03019 Messenger RNA biogenesis [BR:
cod03019
]
Cp106_0821 (rho)
Transcription machinery [BR:
cod03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Cp106_0821 (rho)
Messenger RNA biogenesis [BR:
cod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cp106_0821 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AER68900
LinkDB
All DBs
Position
867883..870069
Genome browser
AA seq
728 aa
AA seq
DB search
MTSFTSGKGDERTSVTTTDNGAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLIAAISG
AQGGKAAQSGHSAAPAAKRNARAQAAPKAEKDSAPVENSVPEVSKEQQEKADQVPAKESK
SRRRRVLKTTGAMDSAHETASSEPISQESSPAEEEKPRRRRVTRRVEVSSEKRDPAENSP
QDKTDTPSESNDGVARVSENGDAEDENRYESRSAARRARRNRARREHREDRQTSQREDNH
AEGDRSSNDEEQRKEASVDNVKTTGRREAPEQQAADQPQTRETREGSENEHPRQRNGRHH
ERGERGDRNRRNRRNRRGRDRDDHRDNSNIEPREDEVLQNIAGILDIVDSNVAFVRTSGY
HAGSADVYVNNQMIRRLGLRAGDAITGQVRMNGDNNHGGHHGHNRGRNRQKYNPLVRVES
VNGMSVEEAKARPDFSKLTPLYPNQRLRLETEPKILTTRVIDLIMPIGKGQRALIVSPPK
AGKTTILQNIANAIATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTA
VAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFL
GAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVN
PSGTRKDELLLVPEEARIMHKLRRILAALDNQQAIDLLIKQLKKTKSNGEFLMQIASSAP
MAADAEEE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcttttacctctggtaaaggcgatgaaaggacatctgtgacaacaacagataac
ggcgcacagcgtaatcttgctgcattgcgtctgcccgagctgcgtaagatcgccgctgaa
atgggtctaaaaggcacctctgcattgcgcaaaggtgatcttatcgccgcgattagcggc
gcgcaggggggaaaagctgcacagagcgggcatagtgccgcgcctgcagcaaagcgtaat
gctcgagcacaggctgcccccaaagcagagaaagactctgcacctgtagaaaactcggtt
ccagaagtatctaaggaacaacaagaaaaggctgaccaggttccagctaaggagtccaag
tcgcgtcgccgtcgcgttctaaagaccacaggagccatggattcagctcatgaaacagct
tccagtgagcctatttcacaggaatcctcgccggcagaggaagaaaagccacggcgacgc
cgtgtgactcgtcgcgtagaagtttcttcggagaagcgcgaccctgcagagaattctccg
caggataaaacggatacgcccagcgaatcgaatgatggtgtagcacgagtttccgagaat
ggcgatgcagaggatgagaatcgctatgagtcgcgttcggctgctcgacgtgctcggcgt
aatcgtgctcgtcgggaacaccgtgaagaccgtcagacgtctcagcgcgaggacaatcac
gctgagggtgatcgatcttctaacgatgaggaacagcgcaaagaagcatccgttgataac
gtgaagacaacggggcgtcgagaggcccctgagcagcaggctgcagatcagccgcaaact
cgggaaactcgtgagggctctgaaaacgagcatcctcgtcagcgcaatggccgtcaccat
gagcgtggcgagcgtggggatcgtaaccgtcgtaaccgccgcaatcgtcggggccgtgac
cgcgacgatcatcgggataactccaacattgagccccgtgaagacgaggttttgcagaac
atcgccggcatcctcgacattgtggatagcaatgtcgctttcgtgcggacctcgggctat
catgcaggctctgcagatgtctacgttaacaaccagatgattcgtcgtttgggtttacgt
gctggcgatgccatcaccggacaggttcggatgaacggcgataacaaccatggcggacat
catgggcataatcgtggacgcaaccgccaaaagtacaatccgttggttcgcgttgaatct
gtcaacggcatgtccgtagaagaagctaaggctcgtccggacttttctaagctcactccg
ctgtacccgaaccagagactgcgtttggaaacagagccgaagatccttaccactcgtgtg
atcgacttgatcatgcctatcggcaaaggccagcgtgcgcttatcgtgtctccgccaaaa
gctggtaagactacgattttgcaaaacatcgctaatgccatcgccacgaataatcccgag
tgctatttgatggtggtgcttgtcgacgagcgccctgaagaagtcaccgacatgcagcgc
tccgtcaagggtgaggttattgcctctaccttcgaccgtccgccaagcgagcacactgct
gtagccgagttggcaatcgagcgtgctaaacgactcgtagaacaaggacaagacgttgtg
gtgcttctagattccatcactcgccttggtcgcgcttataacaactcttcgcctgcttca
ggtcgtatcctgtccggtggcgtggattcgaacgctctctatcctccaaagcgcttcctg
ggtgcggctcgtaacatcgaaaatggtggttcgctgaccatcattgctactgcaatggta
gaaactggttctgcaggcgacaccgtgatctttgaggagtttaagggcaccggcaacgca
gagctcaaactggatcgtaagatctccgagcgtcgagtattccccgcagtagacgttaac
ccgtcaggaactcgtaaggacgagctgcttttggttcctgaagaagctcgcatcatgcat
aagttgcgcaggattctcgcagccttggacaaccaacaggccatcgacttacttattaag
cagcttaagaagaccaaatctaatggtgagttcttgatgcagatcgcttcaagtgcaccg
atggctgcagacgccgaggaggagtaa
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