Corynebacterium pseudotuberculosis 1/06-A: Cp106_1278
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Entry
Cp106_1278 CDS
T02052
Symbol
pbpB
Name
(GenBank) Secreted penicillin-binding protein
Organism
cod
Corynebacterium pseudotuberculosis 1/06-A
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
MecA_N
Lumazine_bd_2
DUF4440
Motif
Other DBs
NCBI-ProteinID:
AER69342
LinkDB
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Position
complement(1390940..1392781)
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AA seq
613 aa
AA seq
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MSMPTNSTLKTMVSLGLSMCLFSGTLVACTPKPASADPTAKAFLADLKDANFSAAGAHTD
SADKVSSVLESSWKGLQAERLRAEITSVDTKDTIATARYTMTWDLPRDRTFSYETSMTLN
RINGEWKIRWQPSALHPRLGANQHLELRAINAERASVVSSDGAAILVPGIKYRLLIDAPS
VTDKDTVARTVAAHLHSARSYDETIPDIKANELADDLKGAKGRYSVTLLSQQTGEALQGQ
LIGINGVTLNKEAALVNKDPRFAPDIIKRVSKIVDSQLEGDNGWTVSSVTADGAALENIE
YHAPKVAPAVRISIDQKVQQAAESAVNLRKDMKTMIVAIRPSNGEILAVAQTPKADEEGD
LALNGQFPPGSTFKVVTASAGIQDEGLNAGSIVPCPGTMNIYGRTVTNYNAFSLGNVPLQ
KAFARSCNTTFANISEKLGQGQLKQIGSQFGIGVDYDIPGLNTLTGSIPEGETPLDRTEA
GYGQGKVLVSPFGMALMSATAAAGKTPTPTLISGRETKMDKHPEALKPETIDQLRSLMGA
VTKPGGTAAGMSAGGEIFGKTGEAEINGGSHAWFTGYRGDLAFATLIVLGGGSEASVAIT
DNFLRNLDELNAH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcccactaattcaactctgaaaactatggtctctttgggcctttcgatgtgc
ttgttttctggaaccttggtggcatgcacgcctaagcccgcgtcagcggaccctacggcg
aaagcctttctggctgatcttaaagacgccaactttagcgctgcaggggctcacaccgat
agcgcggataaagtaagttcggtgttggaatcctcgtggaaaggactccaagcggaaaga
ttgcgtgctgagatcacatcggtggacacaaaagatacaattgcgaccgctcgatatact
atgacctgggatttacctcgtgataggacttttagctatgaaacatctatgacgctgaat
cggataaatggggaatggaaaatccgttggcagccgtcagctttgcatcctcggctaggt
gcgaatcagcacctcgaattgcgggcgattaacgcagaacgcgctagcgtggtttcctcc
gacggcgccgcaattttggtgcctggtattaaatatcgcctgcttatcgacgctcccagc
gtaacagacaaggatacggtcgcgcgtacggttgcggcccacttacattctgctcgaagt
tatgatgaaacgatccctgatattaaagccaatgagctcgcagacgatctaaaaggagca
aaggggcgttactcggttacgctactgagccagcaaacgggtgaggccttgcaagggcag
cttattggcatcaacggagtgacgttgaataaagaagcagcattggtaaacaaagaccca
cgttttgctccggacattattaaacgagtgtcaaaaatcgttgatagtcagttagagggc
gataatgggtggaccgtgtcttcggttacggctgatggcgctgcactggaaaatattgaa
tatcatgccccaaaggtagctcccgctgtccggatcagcattgatcaaaaggtgcagcag
gctgcggaatctgcagtgaatttaagaaaagacatgaagacaatgatcgttgcgatccgt
ccttctaacggggagattctagctgtcgcgcagactcccaaagcagatgaagagggcgat
cttgctcttaacggtcaatttcctccgggatcaacgtttaaggtagtcactgcttctgcc
ggtatacaagacgaagggttaaacgctggcagtatcgtgccatgcccgggcacgatgaat
atctatggaagaacagtaactaactacaatgctttttcgctgggtaatgtccctttacaa
aaggcctttgcgcgatcgtgtaacaccacctttgccaatatttctgagaagctaggtcag
ggacaacttaaacaaatcggaagtcaatttggcatcggcgtggattatgacatccctggc
ttgaataccctcaccgggtcaattccggaaggagagactccgcttgatcgcaccgaggcg
ggatatggtcagggaaaggttctagtgtctccctttgggatggcattgatgtctgcgacc
gctgccgcagggaaaacgccaactccgacactgatctccggacgagaaacaaaaatggat
aagcatcctgaagcgctcaagccagaaaccattgatcagcttcgttctttaatgggggcg
gttaccaaacccggtggaactgccgccggtatgagtgctggcggagagatctttggaaag
actggcgaagcagaaattaacggtggttcccatgcttggtttacggggtatcgaggagac
ttggcctttgctactctcatcgttttgggcggtggctctgaagcatctgtggcaataacc
gataattttctgagaaacctcgacgagcttaatgctcattga
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