KEGG   Comamonas odontotermitis: LAD35_00110
Entry
LAD35_00110       CDS       T07833                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
codo  Comamonas odontotermitis
Pathway
codo00061  Fatty acid biosynthesis
codo00071  Fatty acid degradation
codo01100  Metabolic pathways
codo01212  Fatty acid metabolism
codo02024  Quorum sensing
codo04146  Peroxisome
Module
codo_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:codo00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    LAD35_00110
   00071 Fatty acid degradation
    LAD35_00110
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    LAD35_00110
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LAD35_00110
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:codo01004]
    LAD35_00110
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:codo04147]
    LAD35_00110
Enzymes [BR:codo01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     LAD35_00110
Lipid biosynthesis proteins [BR:codo01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   LAD35_00110
Exosome [BR:codo04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   LAD35_00110
  Exosomal proteins of breast cancer cells
   LAD35_00110
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 DUF2464
Other DBs
NCBI-ProteinID: UBB17103
LinkDB
Position
27396..29342
AA seq 648 aa
MSTTFPKLLLQHAASRPHDAALREKEYGIWQSYDWAHLAALVSHIAAGLSQAGLARGEHL
VLIGANRPRLYATMLAAQSLGAIPVPLYQDAVAAECVFPLNNAEVRFCLVEDQEQVDKLL
ELREQCPLISHIFYDDPRGLRNYSEPGLASLDSLIATGKAYVDSHPQWFEGQVHATQNED
VAAMFFTSGTTGNPKGVVHTHSSLLESASAGAEFENLTSKEEVLAYLPPAWIGQNIFSYA
QWLACGYVVNCPESSSTVNIDLKEVGPTYYFAPPRIFEGILTSVMIRMEDAGLIKRKMFH
HFMEVAKRVGPALRDGQPVSLADKISYRLGDWMVFGPLRNNMGFSRVRVAYTAGEAIGPD
LFTFFRSIGINLKQLYGSTETAVFVCIQPDNQVFADTVGNPIRGVEIRMADNGEILVKSK
GLLKEYYKNPKATAEVLSEDGWYHTSDAGFMDKSGQLKIIDRVKDVGRLKGGANDGAMFA
PKYVENKLKFFPFIKEAVALGDGREKVCAMINIDFEAVGNWAERQNLPYAGYTDLAQKPQ
VYALIKDCVEKVNADLATDAMLAGSQVTRFLVLHKELDADDGELTRTNKVRRGFIADKYG
VLVDALYAGRAEQFIETQVKFEDGRTGSVSATLKIDDSKTFTPVKSVA
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgtccactacctttcccaagctcttgctgcagcatgccgccagccggccgcacgacgct
gcgttgcgcgagaaggaatacggcatctggcaaagctatgactgggcgcatctggcggcc
ctggtctcgcatatcgcggcaggcttgtcgcaagcgggcctcgcacgtggcgagcatctg
gtgctgatcggtgccaaccgccctcgcctctatgccaccatgctggctgcgcagtcgctg
ggcgcgattcccgtgccgctgtaccaggacgccgttgctgcggaatgcgtgttccccctg
aacaacgccgaagtgcgcttttgcctcgtagaagaccaggagcaggtggacaagctgctg
gagctgcgcgagcagtgcccgctgatcagccacatcttctacgacgatccgcgcggtctg
cgcaactattcggagccgggcctcgcatcgctcgacagcctgatcgccactggcaaggcg
tatgtcgacagccacccccagtggtttgagggacaggtgcacgctacacaaaacgaggac
gttgccgcaatgttcttcacctcgggcaccactggcaaccccaagggcgtggtgcacacc
cacagttcgctgctggagagcgcctctgcaggcgccgaattcgagaatctgaccagcaag
gaagaagtgctggcctacctgccccccgcctggatcggccagaacatcttcagctatgcg
caatggctggcctgtggctatgtggtgaactgccctgaatcgagcagcaccgtcaacatc
gatctgaaggaagtcggccccacctactactttgcgccgccccgtatttttgaaggcatt
ctgaccagcgtgatgatccgcatggaagatgcaggcctcatcaaacgcaagatgttccac
cacttcatggaagtggccaaacgggtgggccccgccctgcgtgatggccagcccgtgagc
ctggcggacaagatcagctaccggttgggcgattggatggtgtttggcccactgcgcaac
aacatgggcttcagccgcgtgcgcgttgcctataccgctggcgaggcgatcgggcctgac
ctgttcaccttcttccgctccatcggcatcaacctcaagcaactgtatgggtcgaccgaa
actgccgtttttgtctgtatccagccagacaaccaggtgtttgccgacacggtgggcaat
ccgatccgcggtgtcgaaatcaggatggccgacaacggcgaaatcctggtcaagtccaaa
gggctgctcaaggaatactacaagaaccccaaggccacggccgaggtgctgagcgaagac
ggctggtaccacaccagtgacgcgggcttcatggacaagagcggccagctcaagatcatc
gaccgggtcaaggacgtgggccgcttgaaaggcggcgccaacgacggcgcgatgttcgca
cccaagtatgtcgagaacaagctcaagttcttccctttcatcaaggaagcggtggcactg
ggggacggccgcgaaaaagtctgcgcgatgatcaacatcgacttcgaggccgtgggcaac
tgggccgagcgccagaacctgccctacgcgggctacaccgacctggcgcaaaagccccag
gtttatgcactcatcaaggattgcgtggagaaggtcaacgccgatctggcaaccgatgcc
atgctcgctggcagccaggtcacgcgctttctggtactgcacaaggagcttgatgccgac
gatggcgagttgacccgcaccaacaaggtgcgccgtggcttcatcgccgacaaatacggc
gtgctggtcgatgcgctgtatgccggccgtgcggaacagttcatcgaaacgcaggtgaag
ttcgaagacggccgcaccggcagcgtgagcgccaccttgaagatcgacgacagcaagacc
ttcacgcccgtgaagtctgtcgcctga

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