KEGG   Comamonas odontotermitis: LAD35_01865
Entry
LAD35_01865       CDS       T07833                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
codo  Comamonas odontotermitis
Pathway
codo00550  Peptidoglycan biosynthesis
codo01100  Metabolic pathways
codo01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:codo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    LAD35_01865 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    LAD35_01865 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:codo01011]
    LAD35_01865 (mrdA)
Enzymes [BR:codo01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     LAD35_01865 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:codo01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   LAD35_01865 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer bDLD3
Other DBs
NCBI-ProteinID: UBB17434
LinkDB
Position
422715..424667
AA seq 650 aa
MTEIHNSERDLSQFKLRVVVIGLVVLLCFSLLVTRLYVLQVERHDDLLAQAESNRTAVVP
IVPNRGQIYDRNGVLLATNYSAYTLEITPYKVADIDETIDALSEIIDITPRDRRRFKRLR
EDSRNFDSLPIRSRLTDQEVAKFTAQRYRFPGVDVKARLFRNYPMGEVGAHIIGYIGRIN
QREKERIDDSEDAANYRGTEYIGKTGVEASYEKELHGQTGVERMETSAGGHAVRKLGSAP
ATPGESVVLSIDIKLQKMVEDLYGERRGVAIAIDPRSGELLTMVSKPTYDPNLFVEGIDQ
ESWKALNESIDRPLLNRALRGTYPTGSTYKPFMGLAGLETGRRTPSTIIQDGGSWTFGGH
TFRSGHALGPVDLNRAIQHSSNVYFYTLANEMGVDAIHDFMKPLGFGQITGIDLPGEVRG
VLPSTTWKRETYKRPEQKKWFAGETISLGIGQGYNNFTILQLTHALATLVDNGNSRVPHV
GRALIDPVTNTRHPIEQPESVNLGYKQSNVDAVKRGMVSVVTGGTGRGSFGSARYSAGGK
TGTAQAITIGQKEKYNAAKLAERQRDHALYVAFAPADNPKIAVGVIVENAGFGAGSAAPI
ARRIIDYWLLGDYPSDADMAAMQRGQATAPIGTPRRVEEVSIQPQAETLR
NT seq 1953 nt   +upstreamnt  +downstreamnt
atgaccgaaatccacaattccgaacgcgacctcagccagttcaagctgcgggtggtggtg
atcggcctggtggtgctgctgtgcttttcgctcctcgtcacgcgcctgtatgtgctgcag
gtggagcgccacgatgacctgctggcccaggccgagagcaaccgcacggcggtggtgccc
atcgtgcccaaccgggggcagatctacgaccgcaatggcgtgctgctggccaccaactac
tcggcctacacgctggagatcacgccctacaaggtggcagacatcgacgaaaccatcgat
gcgctgtccgagatcatcgacatcacgccgcgcgaccggcgccgcttcaagcgcctgcgc
gaggactcgcgcaacttcgattcgctgccgatccgctcacgcctgacagaccaggaggtg
gccaagttcaccgcccagcgctaccgcttcccgggcgtggatgtgaaggcgcgcctgttc
cgcaactacccgatgggcgaggtgggtgcgcacatcattggctacatcggccgcatcaac
cagcgcgagaaggagcgcatcgacgattcggaagatgctgccaactaccgcggcaccgaa
tacatcggcaagaccggcgtcgaagccagctacgagaaggaattgcacggccagaccggc
gtggagcgcatggagacatcggctggcggccacgccgtgcgcaagctcggcagcgcgccg
gccacgcctggcgagagcgtggtgctgtccatcgatatcaagctgcagaagatggtggaa
gacctgtatggcgagcgccgaggcgtggcgattgccatcgacccgcgctcgggcgaactg
ctgaccatggtgagcaagcccacctacgacccgaatctgttcgtggaaggcatcgaccag
gaaagctggaaggcgctgaacgagtccattgaccgcccgctgctcaaccgcgcactgcgc
ggcacctaccccaccggctccacctacaagcccttcatggggctggccgggctggaaaca
ggcaggcgcacgccttccaccattatccaggacggcggcagctggacttttggcggccat
accttccgctcgggccatgccctggggccggtagatctgaaccgcgccatccagcactcc
agcaatgtgtacttctacaccctggccaatgaaatgggcgtggatgcgatccacgacttc
atgaagccgctgggatttggccagatcaccggcatcgacctgcccggcgaggtgcgcggc
gtgctgcccagcacgacctggaagcgcgaaacctacaagcgccccgagcagaagaagtgg
tttgccggagaaaccatttcactgggcatcggccagggttacaacaacttcaccatcctg
caactgacgcacgcgctggccaccctggtcgacaacggcaacagccgcgtgccgcatgtg
ggccgagccctgatcgacccggtgaccaatacccgccatccgattgagcaacccgagtcg
gtcaacctgggctacaagcagagcaatgtggatgccgtcaagcggggcatggtgtcggtg
gttacgggcggtacgggccggggatcatttggcagcgcgcgctacagcgctggcggcaag
accggtacggcgcaggccatcaccatcggccagaaagagaaatacaacgcagccaagctg
gccgagcgccagcgcgaccatgcactgtatgtggcatttgccccggcggacaaccccaag
attgccgtgggcgtgatcgtcgagaacgcaggttttggtgcgggcagtgcagcgcccatt
gcccgccggatcatcgattactggctgctgggcgattaccccagtgatgccgacatggcc
gccatgcagcgcgggcaggccacggcaccgattggcacgccgcgtcgcgtggaagaagtg
agcattcagccacaggccgaaacactacgctga

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