Comamonas odontotermitis: LAD35_01865
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Entry
LAD35_01865 CDS
T07833
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00550
Peptidoglycan biosynthesis
codo01100
Metabolic pathways
codo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LAD35_01865 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LAD35_01865 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
codo01011
]
LAD35_01865 (mrdA)
Enzymes [BR:
codo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LAD35_01865 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
codo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LAD35_01865 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bDLD3
Motif
Other DBs
NCBI-ProteinID:
UBB17434
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All DBs
Position
422715..424667
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AA seq
650 aa
AA seq
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MTEIHNSERDLSQFKLRVVVIGLVVLLCFSLLVTRLYVLQVERHDDLLAQAESNRTAVVP
IVPNRGQIYDRNGVLLATNYSAYTLEITPYKVADIDETIDALSEIIDITPRDRRRFKRLR
EDSRNFDSLPIRSRLTDQEVAKFTAQRYRFPGVDVKARLFRNYPMGEVGAHIIGYIGRIN
QREKERIDDSEDAANYRGTEYIGKTGVEASYEKELHGQTGVERMETSAGGHAVRKLGSAP
ATPGESVVLSIDIKLQKMVEDLYGERRGVAIAIDPRSGELLTMVSKPTYDPNLFVEGIDQ
ESWKALNESIDRPLLNRALRGTYPTGSTYKPFMGLAGLETGRRTPSTIIQDGGSWTFGGH
TFRSGHALGPVDLNRAIQHSSNVYFYTLANEMGVDAIHDFMKPLGFGQITGIDLPGEVRG
VLPSTTWKRETYKRPEQKKWFAGETISLGIGQGYNNFTILQLTHALATLVDNGNSRVPHV
GRALIDPVTNTRHPIEQPESVNLGYKQSNVDAVKRGMVSVVTGGTGRGSFGSARYSAGGK
TGTAQAITIGQKEKYNAAKLAERQRDHALYVAFAPADNPKIAVGVIVENAGFGAGSAAPI
ARRIIDYWLLGDYPSDADMAAMQRGQATAPIGTPRRVEEVSIQPQAETLR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaatccacaattccgaacgcgacctcagccagttcaagctgcgggtggtggtg
atcggcctggtggtgctgctgtgcttttcgctcctcgtcacgcgcctgtatgtgctgcag
gtggagcgccacgatgacctgctggcccaggccgagagcaaccgcacggcggtggtgccc
atcgtgcccaaccgggggcagatctacgaccgcaatggcgtgctgctggccaccaactac
tcggcctacacgctggagatcacgccctacaaggtggcagacatcgacgaaaccatcgat
gcgctgtccgagatcatcgacatcacgccgcgcgaccggcgccgcttcaagcgcctgcgc
gaggactcgcgcaacttcgattcgctgccgatccgctcacgcctgacagaccaggaggtg
gccaagttcaccgcccagcgctaccgcttcccgggcgtggatgtgaaggcgcgcctgttc
cgcaactacccgatgggcgaggtgggtgcgcacatcattggctacatcggccgcatcaac
cagcgcgagaaggagcgcatcgacgattcggaagatgctgccaactaccgcggcaccgaa
tacatcggcaagaccggcgtcgaagccagctacgagaaggaattgcacggccagaccggc
gtggagcgcatggagacatcggctggcggccacgccgtgcgcaagctcggcagcgcgccg
gccacgcctggcgagagcgtggtgctgtccatcgatatcaagctgcagaagatggtggaa
gacctgtatggcgagcgccgaggcgtggcgattgccatcgacccgcgctcgggcgaactg
ctgaccatggtgagcaagcccacctacgacccgaatctgttcgtggaaggcatcgaccag
gaaagctggaaggcgctgaacgagtccattgaccgcccgctgctcaaccgcgcactgcgc
ggcacctaccccaccggctccacctacaagcccttcatggggctggccgggctggaaaca
ggcaggcgcacgccttccaccattatccaggacggcggcagctggacttttggcggccat
accttccgctcgggccatgccctggggccggtagatctgaaccgcgccatccagcactcc
agcaatgtgtacttctacaccctggccaatgaaatgggcgtggatgcgatccacgacttc
atgaagccgctgggatttggccagatcaccggcatcgacctgcccggcgaggtgcgcggc
gtgctgcccagcacgacctggaagcgcgaaacctacaagcgccccgagcagaagaagtgg
tttgccggagaaaccatttcactgggcatcggccagggttacaacaacttcaccatcctg
caactgacgcacgcgctggccaccctggtcgacaacggcaacagccgcgtgccgcatgtg
ggccgagccctgatcgacccggtgaccaatacccgccatccgattgagcaacccgagtcg
gtcaacctgggctacaagcagagcaatgtggatgccgtcaagcggggcatggtgtcggtg
gttacgggcggtacgggccggggatcatttggcagcgcgcgctacagcgctggcggcaag
accggtacggcgcaggccatcaccatcggccagaaagagaaatacaacgcagccaagctg
gccgagcgccagcgcgaccatgcactgtatgtggcatttgccccggcggacaaccccaag
attgccgtgggcgtgatcgtcgagaacgcaggttttggtgcgggcagtgcagcgcccatt
gcccgccggatcatcgattactggctgctgggcgattaccccagtgatgccgacatggcc
gccatgcagcgcgggcaggccacggcaccgattggcacgccgcgtcgcgtggaagaagtg
agcattcagccacaggccgaaacactacgctga
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