Comamonas odontotermitis: LAD35_02495
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Entry
LAD35_02495 CDS
T07833
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
codo02000
]
LAD35_02495
Transporters [BR:
codo02000
]
Other transporters
Pores ion channels [TC:
1
]
LAD35_02495
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UBB17544
LinkDB
All DBs
Position
547547..549661
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AA seq
704 aa
AA seq
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MSSCAFAAVGAALARPFSSTSVSPLATGQHRLRAVALAMAAAGLQGAALAQAAEQQQAAV
TVAQADTGGAAESTLATMVVTASGFEQAVEDAPASITVIPRQELEKKAYRDVTDALKDVP
GVVLTGGGSSSDISIRGMGANYTLILVDGKPQNSRETRPNSDGAGIEQGWLPPLSAIERI
EVVRGPMSSLYGSDAMGGVINIITRKVAKQWTGTVSAETTQQESSRSGDMYQSNFYLAGP
IKSDVLGLQIYGQKSRRLEDRFVNGFNEQDSTSGTAKLTLTPNKDHDLALELGRTLQDRY
STKGKTASSTSSYSDYTRNHFALSHTGRWGFGTSTTYLQHEEVDNPSREMNVKNTEFNSQ
IVMPLGERNLTTVGVFYKQEKLTDNGNQLRVANPIDTLKRYQWAVFAENEWRATDQIALT
AGLRMNHDQNYGTDWTPRIYGVWHATPQLSVKGGISTGFKAPNLRAAVADWGQITGGGGD
PAIIRGNPNLKPEKSTSQELGLIWDNRQNFSSSLTLFNTNFKDKITEVRSCEDTEGGGRA
IVTGNCSIYGTPYKFISDRVNVDEATMRGIEATATWKASDDLRLATNYTFTRSEQKSGAF
AGKPLNKMPKHMLNATVDWQASSKLGVWSRVNFRGAASDYLSRTSMAKGTPSFTFMDLGV
NYALSKNVKFSAGVYNLFDKRVDTTDFGAVYDGRRYWAKVTAGF
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctgcgcatttgctgcggtgggcgctgctttggcacgtccgttttcttccacc
tctgtttcgcctttggcaaccggccagcaccgactgcgggccgtcgcgctggcgatggcg
gcggccggcctgcaaggcgcggcgctggcgcaggccgccgagcagcagcaagctgctgtc
accgtggcccaggcagatacgggcggcgcggcagaaagcacgctggcgaccatggtggtc
acggcctccggctttgagcaggcggtggaagacgcgcctgcctcgatcaccgtgattccg
cgccaggagctggagaaaaaagcctaccgggatgtgaccgatgcgctcaaggatgtgccg
ggtgtggtgctgacgggcggcggctcctccagcgacatcagcattcgcggcatgggggcc
aactacacgctgatcctggtggacggcaaaccgcagaactcgcgcgaaacccgccccaac
agcgatggcgccggtattgagcagggctggctgccgccgctgtctgccattgagcgcatc
gaagtcgtgcgcgggcccatgtcgtcgctctacggctccgatgccatgggcggggtgatc
aacatcatcacccgcaaggtggccaagcaatggaccggaacggtgagcgcggagacgacg
cagcaggaatcatcccgctcgggcgacatgtaccagagcaatttctacctggccgggccg
atcaagagcgacgtgctgggcctgcagatctacggccagaaatcgcggcgcctcgaagat
cgctttgtcaacggattcaacgagcaggacagcacctccggcacagccaagctcacgctg
accccgaacaaggaccacgatctggcgctggagttgggccgcaccctgcaggatcgctac
tccaccaagggcaagacggccagcagcacctccagctactccgattacacccgcaaccac
ttcgcgctgtcgcacaccgggcgctggggattcggtacctcgaccacctacctccagcat
gaagaggtggacaacccttcgcgcgagatgaacgtgaagaacaccgaattcaacagccag
atcgtgatgccgctgggcgagcgcaacctgacgaccgtgggcgtcttctacaagcaggaa
aagttgacggacaacggcaaccaactgcgggtggccaacccgatcgacacgctcaagcgc
taccagtgggcggtcttcgccgagaacgaatggcgggccactgaccagattgcgctgaca
gccggcctgcgcatgaaccacgaccagaactacggcaccgactggacgccgcgcatctac
ggcgtgtggcacgccacgccgcagttgagcgtcaagggcggcatctccaccggcttcaag
gcgcccaatctgcgcgcggcggtggccgactgggggcagattaccggtggcggaggcgat
ccggccatcatccgcggcaaccccaacctcaagcccgagaaaagcaccagccaggagttg
ggcctgatctgggacaaccgccagaacttcagcagcagcctgaccttgttcaacaccaac
ttcaaggacaagatcaccgaggtgcgcagctgcgaagacaccgaaggcggtggccgcgcc
atcgtcaccggcaactgcagcatctatggcacaccctacaagttcatcagcgaccgcgtg
aacgtggacgaggccacgatgcgcggcatcgaagccaccgccacctggaaggcctccgac
gacctgcgcctggccaccaactacaccttcacccgttcggagcagaagagcggtgcgttt
gcgggcaagcctctgaacaagatgcccaagcacatgctcaatgccacggtggattggcaa
gccagcagcaagctgggcgtatggagccgtgtcaacttccgcggcgccgcatcggattac
ctgagtcgcacctccatggccaagggcacgccgtccttcaccttcatggatctgggcgtg
aactacgccctgtcaaagaacgtcaagttcagcgccggtgtctacaacctgttcgacaag
cgcgtcgataccaccgacttcggcgccgtgtatgacggccgccgctactgggccaaggtg
actgcgggcttctga
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