KEGG   Comamonas odontotermitis: LAD35_02630
Entry
LAD35_02630       CDS       T07833                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
codo  Comamonas odontotermitis
Pathway
codo03030  DNA replication
codo03430  Mismatch repair
codo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:codo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LAD35_02630 (holA)
   03430 Mismatch repair
    LAD35_02630 (holA)
   03440 Homologous recombination
    LAD35_02630 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:codo03032]
    LAD35_02630 (holA)
   03400 DNA repair and recombination proteins [BR:codo03400]
    LAD35_02630 (holA)
Enzymes [BR:codo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LAD35_02630 (holA)
DNA replication proteins [BR:codo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LAD35_02630 (holA)
DNA repair and recombination proteins [BR:codo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LAD35_02630 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delta_C DNA_pol3_delt_C DUF7706
Other DBs
NCBI-ProteinID: UBB17570
LinkDB
Position
577789..578844
AA seq 351 aa
MQIALNQLTAQLGKGLRTLYTVHGDEALLVQEAVDAIRAAARAAGHSERNSFTVAGAHFD
WSAVLAAGGSLSLFADKQIIEVRIPSGKPGKDGSAALQQLAESSVGNDATLTIVILPRLD
KATKTGAWFAALEANGATIQVDSIERAVLPPWIAQRLQLQGQHVKSGEEGQRTLAFFADR
VEGNLLAAHQEIQKLGLLYPPGELAFEQVEQAVLNVARYDVFKLSDAVLSGQVLRTERML
SGLQAEGEAEVLVHWALAEDIRAMKRVKDALRNGRPMPMALRENRVWGNKERHFERVLPR
ISDAAVARLLHSAHAVDGIVKGLKVPEWPQDGWQALHRLALQTCKACAQGR
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgcaaattgccctgaaccagttgaccgcccagctcggcaagggcctgcgcacgctctac
accgtgcatggcgatgaagccctgctggtgcaggaggccgtggatgcgatccgtgccgcc
gcccgtgcggcggggcatagcgaacgcaacagcttcaccgtggccggtgcgcattttgac
tggagcgccgtgctcgccgcaggaggcagcctctcgctcttcgcggacaagcagatcatc
gaggtccgcattcccagcggcaagccgggcaaggacggcagcgccgccttgcagcaactg
gctgaaagcagcgtgggcaatgatgccacgctcaccatcgtcatcctgcccaggctcgac
aaggcgaccaagacaggcgcctggtttgccgcattggaggccaatggcgcgaccatccag
gtggacagcatcgaacgcgcggtgctgccgccttggattgcccagcgcctgcaattgcag
ggccagcacgtcaaaagcggcgaagaaggccagcgcaccctggctttttttgccgaccgt
gtagagggcaatctgcttgccgcacaccaggaaatccagaagctgggcctgctctatcct
ccgggcgagctggcattcgagcaggtggagcaggccgtgctgaacgtggcgcgctatgac
gtgttcaagctgtcggacgccgtgctgtccggccaggtgctgcgtaccgagcgcatgctc
agtggcctgcaggctgagggcgaggccgaggtgctggtgcattgggcgctggccgaggac
attcgcgcgatgaagcgcgtcaaggacgcgttgcgcaatggccgtcccatgcccatggcg
ctgcgcgaaaaccgtgtctggggcaacaaggagcgccatttcgagcgcgtgctgccgcgc
atcagcgacgcggccgtcgcccggctgctgcattcggcccatgccgtcgatggcattgtc
aaaggcctgaaggtgcccgagtggccccaggatggctggcaggcgctgcaccgcctcgca
ttgcagacctgcaaggcctgtgcgcaggggcgctga

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