KEGG   Comamonas odontotermitis: LAD35_03070
Entry
LAD35_03070       CDS       T07833                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
codo  Comamonas odontotermitis
Pathway
codo00300  Lysine biosynthesis
codo00470  D-Amino acid metabolism
codo01100  Metabolic pathways
codo01110  Biosynthesis of secondary metabolites
codo01120  Microbial metabolism in diverse environments
codo01230  Biosynthesis of amino acids
Module
codo_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:codo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LAD35_03070 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LAD35_03070 (dapF)
Enzymes [BR:codo01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     LAD35_03070 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: UBB17644
LinkDB
Position
678491..679363
AA seq 290 aa
MEIRFTKMQGAGNDFVVLDETAGPLGLRADQYRFLADRHFGVGADQILTVRPAPAPEVDF
EYIIHNADGGEVEQCGNGARCFARFVYDKGLTGKKAIRVQTKKGVIAPELMPDGRVTVNM
GRPRLDPADVPFDTSGLTPVVQHHAKKWSVALDDQAQDATVFAVPVSMGNPHGVLLVDDV
DTAPVQAWGPLLESHPRFPQRVNVGFLQVQDAQHVRLRVYERGVGETLACGTGACAAVVA
GIEQGLLQSPVDVQTRGGLLTIAWSGDASDPVMMTGPATTVFEGRITIPD
NT seq 873 nt   +upstreamnt  +downstreamnt
atggaaatccgcttcaccaagatgcaaggcgccggcaacgactttgtcgtgctggacgag
actgccggcccgctgggcctgcgcgctgaccagtaccgtttcctggccgaccgccacttc
ggcgtgggggcggaccagatcctgaccgtgcgccccgcgcccgcgccggaggttgatttt
gaatacatcatccacaacgccgatggcggcgaggtggagcagtgcggcaacggtgcgcgc
tgttttgcccgttttgtgtatgacaaggggctgaccggcaagaaagccattcgtgtacag
acaaaaaagggcgtgattgcccccgaactgatgcccgatggacgcgtcaccgtcaacatg
gggcggccgcgcctcgatcctgccgacgtgcctttcgataccagcggcctgacgccggtg
gtgcagcaccatgcaaagaaatggtctgtggcgctggatgatcaagcgcaggatgctaca
gtttttgcagttcccgtgtccatgggcaatccccatggtgtcctgctggtggatgatgtt
gacacggcacctgtgcaggcatggggaccgctgctggagtcgcatccacgttttccgcag
agggtgaacgtagggttcttgcaagtgcaggatgcgcagcatgtgcgcctgcgcgtatac
gagcgcggcgtgggcgagaccctggcatgcggcactggcgcctgcgcggcggtggtggca
ggtatcgagcaaggtctgctgcagagcccggttgatgtacagacccgtggcggcttgctg
acgattgcctggagcggtgatgccagcgacccggtcatgatgaccggtccggcgacgacg
gtatttgaagggcgcatcaccattccggactga

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