Comamonas odontotermitis: LAD35_03070
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Entry
LAD35_03070 CDS
T07833
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00300
Lysine biosynthesis
codo00470
D-Amino acid metabolism
codo01100
Metabolic pathways
codo01110
Biosynthesis of secondary metabolites
codo01120
Microbial metabolism in diverse environments
codo01230
Biosynthesis of amino acids
Module
codo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LAD35_03070 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LAD35_03070 (dapF)
Enzymes [BR:
codo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LAD35_03070 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UBB17644
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Position
678491..679363
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AA seq
290 aa
AA seq
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MEIRFTKMQGAGNDFVVLDETAGPLGLRADQYRFLADRHFGVGADQILTVRPAPAPEVDF
EYIIHNADGGEVEQCGNGARCFARFVYDKGLTGKKAIRVQTKKGVIAPELMPDGRVTVNM
GRPRLDPADVPFDTSGLTPVVQHHAKKWSVALDDQAQDATVFAVPVSMGNPHGVLLVDDV
DTAPVQAWGPLLESHPRFPQRVNVGFLQVQDAQHVRLRVYERGVGETLACGTGACAAVVA
GIEQGLLQSPVDVQTRGGLLTIAWSGDASDPVMMTGPATTVFEGRITIPD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccgcttcaccaagatgcaaggcgccggcaacgactttgtcgtgctggacgag
actgccggcccgctgggcctgcgcgctgaccagtaccgtttcctggccgaccgccacttc
ggcgtgggggcggaccagatcctgaccgtgcgccccgcgcccgcgccggaggttgatttt
gaatacatcatccacaacgccgatggcggcgaggtggagcagtgcggcaacggtgcgcgc
tgttttgcccgttttgtgtatgacaaggggctgaccggcaagaaagccattcgtgtacag
acaaaaaagggcgtgattgcccccgaactgatgcccgatggacgcgtcaccgtcaacatg
gggcggccgcgcctcgatcctgccgacgtgcctttcgataccagcggcctgacgccggtg
gtgcagcaccatgcaaagaaatggtctgtggcgctggatgatcaagcgcaggatgctaca
gtttttgcagttcccgtgtccatgggcaatccccatggtgtcctgctggtggatgatgtt
gacacggcacctgtgcaggcatggggaccgctgctggagtcgcatccacgttttccgcag
agggtgaacgtagggttcttgcaagtgcaggatgcgcagcatgtgcgcctgcgcgtatac
gagcgcggcgtgggcgagaccctggcatgcggcactggcgcctgcgcggcggtggtggca
ggtatcgagcaaggtctgctgcagagcccggttgatgtacagacccgtggcggcttgctg
acgattgcctggagcggtgatgccagcgacccggtcatgatgaccggtccggcgacgacg
gtatttgaagggcgcatcaccattccggactga
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