Comamonas odontotermitis: LAD35_03080
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Entry
LAD35_03080 CDS
T07833
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
codo03036
]
LAD35_03080
Chromosome and associated proteins [BR:
codo03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LAD35_03080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
DUF3435
Phage_int_SAM_4
DUF6892
Motif
Other DBs
NCBI-ProteinID:
UBB17646
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Position
680149..681117
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AA seq
322 aa
AA seq
DB search
MASGRRESEQAQQTLAPEMLRYLEHVRVQKRLAARTQTLYLLDLQRLQAMAADAATPALQ
LTSGHIRRFVAQMHSAGRSGRGIALILSGWRGFYTWAGREGLIAHNPVQDVRAPRSPKPL
PKALSVDDAVRFAESANAQGDPWVQARDTAMVELMYGSGLRVGELVGLDVVASDHARGWV
DLQAAEAHVLGKGSKRRTVPVGKEALAALHAWLQLRTQGIPAAGQCDPALFIGVRGARLS
SASVWQRLRERSVAAGMTTPVHPHMLRHSFASHVLQSSQDLRAVQELLGHASITTTQVYT
RLDFQHLAQVYDQAHPRARKKD
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggtcgcagagagtcagagcaggcgcagcagacgctggcgcccgagatgcta
cgctatctggagcatgttcgcgtgcaaaagcgcctggctgcgcgcacgcagaccctgtat
ctgcttgatctgcagcgcctgcaggccatggcggcagatgctgcaacgcctgcgctgcag
ctcacctccggccatattcgccgctttgtcgcgcagatgcattcggcaggccgcagcggg
cgcggcatcgcgctgatcctctccggctggcgcggtttttacacctgggccgggcgcgag
ggcctgatcgcccacaaccctgttcaggatgtgcgcgctcccaggtcacccaagccgctg
cccaaggcgctgtcggtggacgatgcggtgcgttttgccgaaagcgccaatgcccagggc
gacccgtgggtgcaggcacgcgataccgccatggtggagctgatgtacggcagcggcctg
cgcgtgggcgagctggtcgggctggatgtggttgccagcgaccatgcacgcggctgggtg
gacctgcaggcagcggaagcccatgtgctgggcaaaggcagcaagcgccgcaccgtgccc
gtcggcaaggaggcgctggccgccttgcatgcatggcttcaactgcgcacccaggggata
ccggcggccggacagtgcgatccggccctcttcattggagtgcgtggcgcacgcctctcg
tcagccagtgtctggcagcgcctgcgcgagcgcagtgtggctgcaggcatgacgacgccg
gtgcatccgcacatgctgcgccattcctttgccagccatgtgctgcagtccagccaggat
ctgcgtgccgtgcaggagctgctgggccatgccagcattaccaccacgcaggtctatact
cggctggacttccagcatctggcgcaggtctacgaccaggcacatcctcgggcgcgcaag
aaggactga
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